Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_027916.2 Length=160358 Score E Sequences producing significant alignments: (Bits) Value seq233 98.7 1e-15 seq2812 91.5 2e-13 >seq233 Length=4434 Score = 98.7 bits (108), Expect = 1e-15 Identities = 155/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 31162 TGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTCTTAGATGG 31221 |||||| ||||||||| ||||| ||||| | ||||| ||||| || ||| ||||| Sbjct 1319 TGATTGGTATAAATATGTGCATCTGCAATAAAATGTACAAATTCACCAGGTTGTAGATCA 1378 Query 31222 GTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGGTACACCC 31281 || | | ||| |||| | || | |||||||| ||||| || || |||| ||| Sbjct 1379 GTAAGATAGGCTATCATGTAGGTTAACATGGCATAACTAGCTATATTAAAAGGTATACCT 1438 Query 31282 AATCCCAAATCGGCAGATCGTTGATATAACAAACAGG---AAAGTTCATCTCCGGTCACG 31338 ||||| | ||| | |||| ||||||||| ||| ||| | ||| | || || Sbjct 1439 AATCCAACATCACCTGATCTTTGATATAAAGCACAATTCAAAAATCCATTT---GTAACA 1495 Query 31339 TAAAATTGAAATAACACATGACAAGGCGGCAAAGCCATTTC 31379 | ||| || ||||| | ||| || || ||||||||||| || Sbjct 1496 TTAAACTGGAATAATAAATGGCATGGAGGCAAAGCCATCTC 1536 >seq2812 Length=2852 Score = 91.5 bits (100), Expect = 2e-13 Identities = 154/221 (70%), Gaps = 6/221 (3%) Strand=Plus/Plus Query 31162 TGATTGACATAAATATGCGCATCGCCAATAGAGTGTACCAATTCCCCTGGTCTTAGATGG 31221 |||||| ||||||||| ||||| ||||| | ||||| ||||| || ||| ||||| Sbjct 2584 TGATTGGTATAAATATGTGCATCTGCAATAAAATGTACAAATTCACCAGGTTGTAGATCA 2643 Query 31222 GTCAATTTGGCAATCACATGAACCAAAAGCGCATAACTCGCTATGTTGAATGGTACACCC 31281 || | | ||| |||| | || | |||||||| ||||| || || || | ||| Sbjct 2644 GTAAGATAGGCTATCATGTAGGTTAACATGGCATAACTAGCTATATTAAAAGGAATACCT 2703 Query 31282 AATCCCAAATCGGCAGATCGTTGATATAA--CA-AACAGGAAAGTTCATCTCCGGTCACG 31338 ||||| | ||| | |||| ||||||||| || || ||| | ||| | || || Sbjct 2704 AATCCAACATCACCTGATCTTTGATATAAAGCANAATNCAAAAATCCATTT---GTAACA 2760 Query 31339 TAAAATTGAAATAACACATGACAAGGCGGCAAAGCCATTTC 31379 | ||| || ||||| ||| || || ||||||||||| || Sbjct 2761 TTAAACTGGAATAANNAATGGCATGGAGGCAAAGCCATCTC 2801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512963560008560