Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq7557 86.0 4e-12 seq2381 86.0 4e-12 >seq7557 Length=3014 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGC 27846 ||||||||| ||||| || || || || || || ||||| | || || ||| | | Sbjct 2557 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 2498 Query 27847 ACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | || || | ||| |||||| ||||| ||||||||||| | || || Sbjct 2497 AGATACCATTGAGAAT--GTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGAT 2440 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 || ||| | | |||||||| || |||||| | || |||| | | ||| | || || ||| Sbjct 2439 CAACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTAC 2380 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 |||||||||||||| || || | ||||||||| Sbjct 2379 AACATCCAAAAAGAAAGTACCATTCATTTGGTT 2347 >seq2381 Length=3349 Score = 86.0 bits (94), Expect = 4e-12 Identities = 148/213 (69%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAA--AGC 27846 ||||||||| ||||| || || || || || || ||||| | || || ||| | | Sbjct 870 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 811 Query 27847 ACCGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAG 27906 | || || | ||| |||||| ||||| ||||||||||| | || || Sbjct 810 AGATACCATTGAGAAT--GTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGAT 753 Query 27907 CAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTAC 27966 || ||| | | |||||||| || |||||| | || |||| | | ||| | || || ||| Sbjct 752 CAACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTAC 693 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTT 27999 |||||||||||||| || || | ||||||||| Sbjct 692 AACATCCAAAAAGAAAGTACCCTTCATTTGGTT 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355825851485829