Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq2381 140 8e-28 seq7557 134 3e-26 seq7574 113 1e-19 >seq2381 Length=3349 Score = 140 bits (154), Expect = 8e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||||| || |||||||||||||| || || | |||| | ||||| Sbjct 654 TCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGGCTTCTTCC 713 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| || || || || || || ||||| | |||||| || || || | |||||| || Sbjct 714 GTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTT 773 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| || || ||| || || || ||||| || || ||| ||||| | ||| || Sbjct 774 GTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACCTCTAAAGTAAT 833 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| ||||| ||||| | |||||| Sbjct 834 TGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 870 >seq7557 Length=3014 Score = 134 bits (148), Expect = 3e-26 Identities = 145/192 (76%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 210924 TCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCTGCGAAG 210983 |||||||||||||| || || | |||| | ||||| ||||| || || || || || || Sbjct 2366 TCTTTTTGGATGTTGTAGTCAGAAAGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAA 2425 Query 210984 ATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTCACGTTT 211043 ||||| | |||||| || || || | |||||| |||||||| || || ||| || || Sbjct 2426 ATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTC 2485 Query 211044 TCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACA 211103 || ||||| || || ||| ||||| | ||| || |||||||| ||||| ||||| ||| Sbjct 2486 TCAATGGTATCTGATGGTTCTACCTCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACA 2545 Query 211104 AACACCTGCATT 211115 || | |||||| Sbjct 2546 AAGATTTGCATT 2557 >seq7574 Length=465 Score = 113 bits (124), Expect = 1e-19 Identities = 155/217 (71%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 |||||| || | ||||| || |||||||||||||| || || | ||| | ||||| Sbjct 212 TCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAAAGACTTCTTCC 271 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||||| || || || | ||||| | |||||| || || || | |||||| || Sbjct 272 GTCTTCAAGTTGTTTATTTTTTTTTATAAGTCTTTGTTGATCTGGTGGTATTCCTTCTTT 331 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||| || || ||| || || || ||||| || || ||| ||||| | ||| || Sbjct 332 GTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACCTCTAAAGTAAT 391 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| ||||| ||||| | |||||| Sbjct 392 TGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCATT 428 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159026845271855