Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq2381 98.7 9e-16 seq7557 95.1 1e-14 >seq2381 Length=3349 Score = 98.7 bits (108), Expect = 9e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||||||||| | || |||||||| || || || |||||||| || || || || | | Sbjct 643 CCTCCTCTTAATCTTAGAACCAAATGAAGGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 702 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || ||| | |||| ||||| ||||| || ||||| ||||| | || || || | || Sbjct 703 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 762 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | ||||||||| ||||| ||||| || | | ||||| | || || Sbjct 763 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 822 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || | ||||| || || || || |||||||||||||| Sbjct 823 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 869 >seq7557 Length=3014 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39058 CCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCA 39117 ||||||||||| | || |||||||| | || || |||||||| || || || || | | Sbjct 2330 CCTCCTCTTAATCTTAGAACCAAATGAATGGTACTTTCTTTTTGGATGTTGTAGTCAGAA 2389 Query 39118 AGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGC 39177 || ||| | |||| ||||| ||||| || ||||| ||||| | || || || | || Sbjct 2390 AGGCTTCTTCCGTCTTCAAGTTGTTTACCAGCAAAAATAAGTCTTTGTTGATCTGGTGGT 2449 Query 39178 ACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACG 39237 | | ||||||||| ||||| ||||| || | | ||||| | || || Sbjct 2450 ATTCCTTCTTTGTCCTGAATTTTAGCTTTGACATTCTCAATGGTATCTGATGGTTCTACC 2509 Query 39238 TCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || | || || | ||||| || || || || |||||||||||||| Sbjct 2510 TCTAAAGTAATTGTCTTTCCTGTGAGTGTCTTGACAAAGATTTGCAT 2556 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429501483921851