Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq7557 111 1e-19 seq2381 109 4e-19 seq7574 84.2 1e-11 >seq7557 Length=3014 Score = 111 bits (122), Expect = 1e-19 Identities = 170/234 (73%), Gaps = 10/234 (4%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || ||||| ||||| || || ||| | || || || | | Sbjct 2557 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 2498 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| | ||| | |||| || ||||||||||| |||| ||||||| Sbjct 2497 AGATACCATTGAGAATGTCAAAGCTAAAA-TTCAGGACAAAGAAGGAATACCACCAGATC 2439 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTA 23786 |||| | | || ||||| || |||||||| ||||||| | | | |||| || || Sbjct 2438 AACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTT--CTGACTA 2381 Query 23787 CAACATACAAAAAG--AGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||| ||||||| ||| | |||| ||||| ||| |||| || |||||||| Sbjct 2380 CAACATCCAAAAAGAAAGTAC-CATT-CATTTGGTTCTAAGATTAAGAGGAGGA 2329 >seq2381 Length=3349 Score = 109 bits (120), Expect = 4e-19 Identities = 166/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || ||||| ||||| || || ||| | || || || | | Sbjct 870 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 811 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| | ||| | |||| || ||||||||||| |||| ||||||| Sbjct 810 AGATACCATTGAGAATGTCAAAGCTAAAA-TTCAGGACAAAGAAGGAATACCACCAGATC 752 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTA 23786 |||| | | || ||||| || |||||||| ||||||| | | | |||| || || Sbjct 751 AACAAAGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTT--CTGACTA 694 Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||||| |||||||| || | ||||| ||| |||| || |||||||| Sbjct 693 CAACATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGAGGAGGA 642 >seq7574 Length=465 Score = 84.2 bits (92), Expect = 1e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||| || || || || || ||||| ||||| || || ||| | || || || | | Sbjct 428 AATGCAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATC 369 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 || || |||| ||| | ||| | |||| || ||||||||||| |||| ||||||| Sbjct 368 AGATACCATTGAGAATGTCAAAGCTAAAA-TTCAGGACAAAGAAGGAATACCACCAGATC 310 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 |||| | | ||| |||||||| ||||||| | | | | | || |||| Sbjct 309 AACAAAGACTTATAAAAAAAAATAAACAACTTGAAGACGGAAGAAGTCTTTCTGACTACA 250 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| |||||||| || | ||||| ||| |||| || |||||||| Sbjct 249 ACATCCAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGAGGAGGA 200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337974885040916