Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06]
8,427 sequences; 13,823,425 total letters
Query= NC_032111.1
Length=163005
Score E
Sequences producing significant alignments: (Bits) Value
seq1856 185 9e-42
seq166 104 2e-17
seq8103 84.2 2e-11
seq7251 82.4 8e-11
>seq1856
Length=1984
Score = 185 bits (204), Expect = 9e-42
Identities = 363/531 (68%), Gaps = 18/531 (3%)
Strand=Plus/Minus
Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567
||||||||||||| || || ||||| || || ||||||||||||||||| |
Sbjct 1459 ACATGCAAAATCAGTGTGGCAACCCTCATCTCTTGATATTAATTCATTAGAAAATGTAAG 1400
Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627
|||||||| ||||||| ||| || | |||||| || | |||||| || | ||||||
Sbjct 1399 ACCTGGCATCAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCTACTAAAGAA 1340
Query 23628 AATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAATCAGA 23687
||| || || ||||| |||||||| | || | | | | || | | | | | | ||
Sbjct 1339 AATTCCTTCTACAGCTGCAAAGGCGATTAGCC-TATCGCTAAAGGGGGAATCTGA--AGC 1283
Query 23688 AATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAA----TTGTTTCAATTG 23743
||| ||||| || ||| | ||||| ||| | ||| | ||||| || ||
Sbjct 1282 AATGTATTTTAATGCCCATTCGGCCTT----TTTCCTGACTATAGGTATTGTTGAAACTG 1227
Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTAT 23803
| || || || | | || |||||| ||| | | | ||||| || ||| ||
Sbjct 1226 CATTAAATAGCCTATTCTTCTCTTCAGAATCAGAAACCAACACTTCAATAAGCAAAGAAT 1167
Query 23804 ACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAG 23863
|||| |||||||| || ||| ||||| || || || |||||| ||| ||||| |
Sbjct 1166 ACATCTCAGAATGGATTACTTCCATAGCTATTTGGAAGGAATAAAATGCTCTTGCTTCTG 1107
Query 23864 ACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAG 23923
| ||||| ||| | ||||||| ||| | |||||| |||||||||||||| |
Sbjct 1106 GTATCTGAACCTCACTTGCAAATCTTACAGCCAGATTTTCCATAACAATACCATCAGATG 1047
Query 23924 CAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGAT--AAT---TT 23978
| ||||| || || || |||| ||| ||||||| ||||||||| || || ||| ||
Sbjct 1046 CCGCAAAAAATGCGAGTACATGTTTAATAAAATTTCTTTCATC--TTCATTCAATCTGTT 989
Query 23979 TTTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029
|| ||| ||| |||| | |||||||||||| ||| |||||||||
Sbjct 988 TTCCCATTCAAACTTATCAACAGTTAAATCAACTTCCTCAGTTGTCCAAAA 938
>seq166
Length=1757
Score = 104 bits (114), Expect = 2e-17
Identities = 109/144 (76%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 23508 ACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAA 23567
||||||||||||| || || ||||| || || ||||||||||||||||| |
Sbjct 290 ACATGCAAAATCAGTGTGNCAACCCTCATCNCTTGATATTAATTCATTAGAAAATGTAAG 231
Query 23568 TCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAA 23627
|||||||| ||||||| ||| || | |||||| || | |||||| || | ||||||
Sbjct 230 ACCTGGCATCAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCTACTAAAGAA 171
Query 23628 AATACCCTCAACAGCCGCAAAGGC 23651
||| || || ||||| ||||||||
Sbjct 170 AATTCCTTCTACAGCTGCAAAGGC 147
>seq8103
Length=650
Score = 84.2 bits (92), Expect = 2e-11
Identities = 107/145 (74%), Gaps = 3/145 (2%)
Strand=Plus/Minus
Query 23508 ACATGCAAAATCACAATGTAGG-CCTTCATCCCTACTAATCAATTCATTAGAAAATGTTA 23566
||||||||||||| ||| | || ||||| || || ||| ||||||||||||| |
Sbjct 171 ACATGCAAAATCAG--TGTGGCACCCTCATCTCTTGATATTAATACATTAGAAAATGTAA 114
Query 23567 ATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGA 23626
|||||||| ||||||| ||| || | |||||| || | |||||| || | ||| |
Sbjct 113 GACCTGGCATCAATCCTCTTTTCTTTAGCCAAAAAATAGAAGCAAAGGAGCTACTAAAAA 54
Query 23627 AAATACCCTCAACAGCCGCAAAGGC 23651
| | || || ||||| ||||||||
Sbjct 53 AGGTTCCTTCTACAGCTGCAAAGGC 29
>seq7251
Length=5617
Score = 82.4 bits (90), Expect = 8e-11
Identities = 87/115 (76%), Gaps = 0/115 (0%)
Strand=Plus/Minus
Query 117517 ATTGGGTGATAAATTTACCAGTAGAACTAGTCAAAAAGGTACCATTGCATTGATTGCAGA 117576
|||||| |||||||||| |||||| | | ||||| ||| ||| |||||||| |||
Sbjct 2712 ATTGGGGGATAAATTTAGTAGTAGACATGGACAAAAGGGTGTGGTTGGATTGATTGTAGA 2653
Query 117577 CGAATCAGAATTACCATATGATGATGATGGAATTAAACCAGATATTATTATAAAT 117631
||| | | ||||||| | |||| | || ||||| || ||||||||||| |||
Sbjct 2652 AGAAATAAATTTACCATTTAATGAAAAAGGTATTAAGCCTGATATTATTATGAAT 2598
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 521433067757800
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