Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anncaliia_20algerae_20[genbank_20GCA_5F000313815.1_202012-06-06] 8,427 sequences; 13,823,425 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2381 152 1e-31 seq7557 147 5e-30 seq7574 129 1e-24 >seq2381 Length=3349 Score = 152 bits (168), Expect = 1e-31 Identities = 165/219 (75%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||||||||| || || || | ||||| ||| ||||| Sbjct 866 CAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATCAGAT 807 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| || |||||||||||||||||||| || || || || ||| Sbjct 806 ACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCAACAA 747 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || || || ||||| || ||||| ||||| | ||| | || || ||| || Sbjct 746 AGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTACAACATC 687 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||| || || ||| | ||| | ||| | ||| Sbjct 686 CAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGA 648 >seq7557 Length=3014 Score = 147 bits (162), Expect = 5e-30 Identities = 146/189 (77%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||||||||| || || || | ||||| ||| ||||| Sbjct 2553 CAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATCAGAT 2494 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| || |||||||||||||||||||| || || || || ||| Sbjct 2493 ACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCAACAA 2434 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| || || || ||||| || ||||| ||||| | ||| | || || ||| || Sbjct 2433 AGACTTATTTTTGCTGGTAAACAACTTGAAGACGGAAGAAGCCTTTCTGACTACAACATC 2374 Query 178104 CAAAAAGAA 178112 ||||||||| Sbjct 2373 CAAAAAGAA 2365 >seq7574 Length=465 Score = 129 bits (142), Expect = 1e-24 Identities = 160/219 (73%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || || || ||||||||||| || || || | ||||| ||| ||||| Sbjct 424 CAAATCTTTGTCAAGACACTCACAGGAAAGACAATTACTTTAGAGGTAGAACCATCAGAT 365 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| ||||| |||||| || |||||||||||||||||||| || || || || ||| Sbjct 364 ACCATTGAGAATGTCAAAGCTAAAATTCAGGACAAAGAAGGAATACCACCAGATCAACAA 305 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 ||||||| ||||| || ||||| ||||| | |||| | || || ||| || Sbjct 304 AGACTTATAAAAAAAAATAAACAACTTGAAGACGGAAGAAGTCTTTCTGACTACAACATC 245 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGA 178142 ||||||||| || || ||| | ||| | ||| | ||| Sbjct 244 CAAAAAGAAAGTACCCTTCATTTGGTTCTAAGATTAAGA 206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203601232013838