Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq35 122 2e-22 >seq35 Length=128636 Score = 122 bits (134), Expect = 2e-22 Identities = 682/1072 (64%), Gaps = 45/1072 (4%) Strand=Plus/Plus Query 281769 TCTTTACCACCCTGCAGCCTCGACCCAAACTGACCCTCCGGCAACAACCAGTTAATGTTA 281828 |||||||| ||| || || || ||||| ||||| || || | | | || ||||| Sbjct 43577 TCTTTACCCCCCAAAAGTCTAGAACCAAATTGACCAATTGGTAAAAGCAAATTTATGTTG 43636 Query 281829 TTGCTCCCGACGTAATCCTGAGCCAGGTTGACGATTGTCCCCTGA-AGCGATACCTCACC 281887 |||||||| || | || || || | |||| ||||| ||| | |||| | ||||| Sbjct 43637 TTGCTCCCTACAAAGTCATGCGCTAAATTGATAATTGTTGA-TGATAACGATGCTTCACC 43695 Query 281888 GTGGTGATAGGCGCTGTGTTCGGCAACATAACC-ACTGAACTGTGCTACCTTCACGTCTG 281946 ||| ||||| || |||||| | ||||||||| ||| | ||||||||| || | || Sbjct 43696 GTGATGATATGCAGAGTGTTCTGAAACATAACCTACT-AGCTGTGCTACTTTTATTTCAT 43754 Query 281947 ATGTCAAGTTGCGTTTGAAAGCGCAATATAATACTTTTCGTTGAGAAGGCTTGAAACCAT 282006 | | || || | ||| ||| || | | ||||||| |||| |||||| ||||||| Sbjct 43755 TTCTTAAATTTCTTTTAAAACATGAAAAAATAACTTTTCTTTGACCAGGCTTTAAACCAT 43814 Query 282007 CAACGACAGACGGAATGCTGCGTTCCAGGTCATACCGC----GAGAACAAAATAAGTTCC 282062 | | ||||| ||||| ||| | || || |||| || || |||||||| ||| Sbjct 43815 CGATTACAGAAGGAATAGAACGT---ATGTTAT-CCGCCATTGAAAATAAAATAAGCTCC 43870 Query 282063 TTGTCAATGAAGTCGGGAACGGGAACCTCGGGCTTCTTGTGGT-----CAAGTTGGTTTC 282117 |||| || || || | | || | ||| |||| | ||| || | Sbjct 43871 TTGTTAACAAAATCTTTGATTGAAAT----GATTTCCTGTGCTTGATCCAAAAAAGTC-C 43925 Query 282118 CCGGCTCGTATGCCGTCATCCACTCCTTGCGATCCTCGGCCCGAGTCTTGTTGAAAGAAC 282177 | || || | || | ||| || | || || ||| |||||||||| | | Sbjct 43926 CGGGTTCAAACGCACCAAGCCATGTTTTTCTTTCATCCGCCTTTTTCTTGTTGAATGCAA 43985 Query 282178 GATCGATGAGCTCTC---CAGAATCAGAAGTCCACGTAAACGTCTTCATAAGAGTCTTCA 282234 |||| | |||| | || |||| | | | ||| || || | | | | | Sbjct 43986 GATCTACAAGCTGTTTGTCATCATCAAATAGCGGAGAAAATGTTTTTACATGCAGATCAA 44045 Query 282235 GGTTGCTGAAGTAATGCTTGGCATCAG-TGC--TGGAACTCGTACCGAGACCCTTGTAAT 282291 | || || || ||||| ||||| | ||| ||||| ||||| | ||| ||||| | Sbjct 44046 GATTCGAAAAATACTGCTTAGCATCTGCTGCAGTGGAA---GTACCCAAACCTTTGTAGT 44102 Query 282292 ACTTGATTTGATA---CTTAGAATAATC--CTTCGTGGTC-TTCACCCAATCCTCGTAAT 282345 | || ||| | ||| |||| | | ||| || ||| | || || || | Sbjct 44103 ATTTTATTGTCCAGCCCTTGGAATTACGAGCCTCGATATCATTCTTAAATTCTTCATATT 44162 Query 282346 CCGGAAGACTATAAAATTCGCGAACGTCCTTTCCTTTCTTGGCGACC--ACGATAGGTGT 282403 | |||| | || |||| || ||| | || | |||| ||| | | || || ||||| Sbjct 44163 CAGGAACAGTAAAAAAATCC--AACTTTCTGTTCTTTTTTGTGGCTCTGACAATCGGTGT 44220 Query 282404 GATGAACTTCTTCAAGAAACCTGGAATTTCTAGGAGACTGGGAAAACAGCTATGGAAAAA 282463 |||||| | || || || || |||| || ||| || ||| | || ||||| Sbjct 44221 GATGAATTCCTGTAAAAATCCATTGATTTTTAAGAGGGAAGGGAAAAAATGATCTAAAAA 44280 Query 282464 GTTCATGACAAGACCAGAAATGTGAGTTCCGTCAACATCCGCGTCGGTCATGATCATCAC 282523 || || | | || |||||||| || |||| |||| || ||||| ||||| | Sbjct 44281 ATTAATTATCAATCCTTTAATGTGAGAACCATCAAAATCCTGATCTGTCATTATCATTAT 44340 Query 282524 ATGACCGTATCTCAGAGAAGAAGTGTCTTTGTACACTTTACCGGTTTGAAGGCCCAAAAT 282583 || || ||||| |||| ||||||||| || ||| || ||| || || || || Sbjct 44341 GTGCCCATATCTAAGAGTGGAAGTGTCTGAATATGTTTTGCCATGTTGCAGTCCTAATAT 44400 Query 282584 TTGTTTGAGCGCGGTGATTTCTTCGTTCTTTGTGATACTTGC--CACAGATGCATCGCGA 282641 || ||| | ||| | |||||| | |||| | || |||| | ||| || | Sbjct 44401 TTTTTTAATTGCGCTTATTTCTGCATTCTCCAT--TATTTGCTTGTTTGCTGCTTCCCTC 44458 Query 282642 ACGTTCAGCAACTTACCGCGGAGAGGAAAAACACCATATCTCTCGCGACCGACCACGGAC 282701 || || |||| |||||| || | ||||| |||||||| | || | ||| || ||| Sbjct 44459 ACATTTAGCAGCTTACCACGTAATGGAAACACACCATACTTGTCTCTACCAACGACGCTT 44518 Query 282702 AGTCCTGCAATTGCAAGTGTTGCTGCGGAATCTCCCTCCGTCAAGATGAGAGTACACATC 282761 | ||||||| ||| | |||| ||| ||||| || || ||||| || || || || Sbjct 44519 AAACCTGCAACTGCCAATGTTTTTGCAGAATCACCTTCTGTCAAAATAAGTGTGCATTCG 44578 Query 282762 TTACTATGATTTGTGCCCGCCCATGCAGCATCGTTTAGTTTAGGGATGCCGG 282813 ||| | ||||| || ||||| ||||| | ||| || || ||||||| Sbjct 44579 GAACTCTTTTTTGTTCCTGCCCAGTTCGCATCTTCTAGCTTGGGAATGCCGG 44630 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823159691060