Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_001987.1 Length=108409 Score E Sequences producing significant alignments: (Bits) Value seq29 105 5e-18 >seq29 Length=110338 Score = 105 bits (116), Expect = 5e-18 Identities = 277/420 (66%), Gaps = 2/420 (0%) Strand=Plus/Minus Query 97033 AGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGA 97092 || |||||| | | | |||| ||||| | |||| ||| | ||||||| | ||| Sbjct 17798 AGTTGCTCTTTCAATGGTTCAACGTGATCCTTGTAAACGTGCGTGTCTCCTATAAAATGA 17739 Query 97093 ATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGAATAG 97152 |||||||| | ||| ||| || || | | || | || || | | || ||| Sbjct 17738 ATAAATTCACTAGGTTCTAGATTTGTTAATTTTGCCACAATTATCGTAAGCAAAGCATAA 17679 Query 97153 CTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATA-ACTGACA 97211 || |||||||||||||| || || | || | |||| |||||||||| || | | || || Sbjct 17678 CTTGCAATGTTAAAAGGAACACCCAAACCAACATCACCTGATCTTTGGTACAGAATG-CA 17620 Query 97212 GGAAAGCTTTCCATCACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGCCAT 97271 | | ||| | || |||| | ||| ||| || |||||| || || | ||||| Sbjct 17619 GCTTAACTTGTTACCATACACCTTAAAGTGAAATAAAGTATGACACGGTGGAAGTGCCAT 17560 Query 97272 TTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTTTGT 97331 || || | ||| |||||| ||||||| | || |||||| |||||| ||||| Sbjct 17559 TTCCTTAAGCTGTAAAGGATTCCACGCACACACAATCAGTCTTCTGCTGGTTGGATTTGT 17500 Query 97332 GTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTGCTT 97391 | || | ||| | | | | | ||||||| || | ||| | ||||| ||| Sbjct 17499 CTTAATTTGCTCAATAACATCCCTAAGCTGATCAATTCCCTTTCCTTCGTAATTTGTCTT 17440 Query 97392 AAGACCTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCAAGGTC 97451 || |||| ||| ||| |||| ||||| || || |||||||||||||| ||||| Sbjct 17439 GCACGTTTCATATGGTGCACCATAATGTCTCCACTGAAAGCCATAAACAGGTCCCAGGTC 17380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 346783737961340