Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq34 102 7e-17 seq32 102 7e-17 >seq34 Length=123199 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | | |||||| |||||||| | ||| || || || || || ||||| | Sbjct 109587 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC--TG 109644 Query 118572 ATAGTGCGCGTA--TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| || | | || || ||||||||||| || | || || | |||||| || |||| Sbjct 109645 ATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 109704 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||| ||| ||| || | ||| | | | |||| ||| || | Sbjct 109705 GAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTA 109764 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || ||||| || |||||||| |||||||| Sbjct 109765 CCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | | |||||| |||||||| | ||| || || || || || ||||| | Sbjct 13614 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC--TG 13557 Query 118572 ATAGTGCGCGTA--TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| || | | || || ||||||||||| || | || || | |||||| || |||| Sbjct 13556 ATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 13497 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||| ||| ||| || | ||| | | | |||| ||| || | Sbjct 13496 GAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTA 13437 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || ||||| || |||||||| |||||||| Sbjct 13436 CCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 102 bits (112), Expect = 7e-17 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 118512 CCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTC 118571 ||||| | | |||||| |||||||| | ||| || || || || || ||||| | Sbjct 23126 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC--TG 23183 Query 118572 ATAGTGCGCGTA--TCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 ||| || | | || || ||||||||||| || | || || | |||||| || |||| Sbjct 23184 ATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 23243 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || |||||| ||| ||| ||| || | ||| | | | |||| ||| || | Sbjct 23244 GAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTA 23303 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | || | || || || ||||| || |||||||| |||||||| Sbjct 23304 CCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433830072186904