Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_002371.2 Length=41724 Score E Sequences producing significant alignments: (Bits) Value seq18 307 3e-79 >seq18 Length=4217 Score = 307 bits (340), Expect = 3e-79 Identities = 632/936 (68%), Gaps = 9/936 (1%) Strand=Plus/Plus Query 19713 TTAAATTTCACT-TTTAAAACCCTTACGCTTTAATATGTATTTAGGCCGCTGTTTGGTTT 19771 ||| | |||| | |||||| | ||| ||||| || ||| | || || | || |||| Sbjct 1848 TTATACTTCATTATTTAAATCTCTT----TTTAAAATATATCTTGGTCGTTTCTTAGTTT 1903 Query 19772 CTATGTAAATTCTACCAATATATTCTCCAAGAATACCTATTCCTATCAATTGAACGCCAC 19831 | || || || |||||||||||||| || | || ||||||||||| | ||| || |||| Sbjct 1904 CCATATAGATCCTACCAATATATTCCCCTAAAACGCCTATTCCTATAAGTTGTACACCAC 1963 Query 19832 CCAGGAAAAGAACAGAAACAAGAAGAGACGGGTAGCCAGGAACATTATTTCC--AAATAT 19889 | | || || | ||||| | | ||||| || || |||| |||||| ||||| Sbjct 1964 CTAAAAATAGGATTGAAACTAATAATGACGGATATCCTTTTACATCATTTCCCCAAATAA 2023 Query 19890 TAATTTATCAATAATCATCCATGCACCGTAAAGGAATGACATACCTGCAATAAACAATCC 19949 || ||| | || |||| ||| | ||| || | || || | |||||| || | ||| Sbjct 2024 TAGTTTCTAAA--ATCAACCAAGAACCATATAAAAAAGATAAGGTTGCAATTAAAAGTCC 2081 Query 19950 AATGTAAGTCCATATGCGGAGCGGAAATGTTGAGAAAGAAGTTATTCCCTCCAGCGCCAG 20009 || || ||||| || | | || | ||||| ||| || | || || | || || Sbjct 2082 AACATATGTCCAAATTCTCAAAGGTATCGTTGAAAAACTTGTAACCCCTTCTAATGCAAG 2141 Query 20010 GTTCCATAATTTCCAGCCGTTGAATTTCGAATCACCGGCCACGCGTTCGGCACGGGCATA 20069 ||||| | ||||| || || || || | | ||| || | | | ||| |||| Sbjct 2142 ATTCCAAAGCTTCCACCCATTAAACTTGGTTTGACCAGCACTTCTTGTAGGACGAACATA 2201 Query 20070 TTTAACAACATCCGTTTTTCCGCCAACCCAACTGAGCACACCCTTCATAAACAAGTTGCG 20129 || ||||||||| | ||||| ||||||||| || || || |||||||| | ||| Sbjct 2202 TTCAACAACATCGATCTTTCCACCAACCCAAGAAAGTACTCCTTTCATAAAAAGGTTTAT 2261 Query 20130 TTCTGGCATTTGTTTGATGTTCTCGACAACCGCACGGCTCATTAACCGAAAGTCGCCAAC 20189 ||| || | | || || || || |||| | | | |||||| ||||| || ||||| Sbjct 2262 TTCAGGTAGTCTCTTAATATTTTCTACAATCTCTCTAGACATTAATCGAAAATCACCAAC 2321 Query 20190 ATTTTCTTCGATTTTTGGATTGCTGATTTTATTGTGCAGCTTATAAAACCACTCAGCTGT 20249 ||||||||| ||||| || ||| || || || || | |||||| | ||| || Sbjct 2322 ATTTTCTTCAATTTTAGGTGAGCTAATCTTGTTATGTAATCGATAAAATGCCAAAGCCGT 2381 Query 20250 CTTACGCTTCATGCGCCCGTCAGTTGAGCGGTCTGAGCGCTTAGCCAGCACCATATCCGC 20309 | || | | ||||| | ||| || ||||| | |||||||| || Sbjct 2382 TGATCTTTTTAAATAGCTATCAGTACTTCTGTCACTTCGTTTAGCTAAAACCATATCAGC 2441 Query 20310 GCCAGCCTGCCACTTCTCAATGAGATGAGGGATAACTTCTATCGGATCCTGTAAATCGAC 20369 |||||||||||||| |||| || | || ||||| || || || ||||| | || || Sbjct 2442 TCCAGCCTGCCACTTTGCAATCAGTAGCGGAATAACCTCAATGGGGTCCTGAAGGTCAAC 2501 Query 20370 ATCAATAGGAATGACCGCATCCCCGGTTGCATGGTCGAGACCCGCGAAAAGAGCAGGTTC 20429 |||||| ||||| || ||||| || |||||||| || | || || || | |||||| || Sbjct 2502 ATCAATTGGAATAACAGCATCACCAGTTGCATGCTCTATCCCTGCAAATAAAGCAGGCTC 2561 Query 20430 TTTACCGAAGTTTCGCGTAAACGAAAGCGGAATAACGAGCGGATCAGATGCAGCTATTTT 20489 |||||| ||||||| ||||| | | |||| | | ||| | | || || Sbjct 2562 TTTACCAAAGTTTCTAGTAAAACTTAATGCTCTAACAAACTTATCTGTAAGTGATAGTTC 2621 Query 20490 GTTAATTATTGATTCAGTCGCATCTTTACTACCATCATTAATAAAAACGATCTCAATTTC 20549 |||||| ||| |||| || |||||||||||||||||||| |||| |||||| | || Sbjct 2622 GTTAATAATTAATTCTGTTTTGTCTTTACTACCATCATTAATGAAAATGATCTCCACATC 2681 Query 20550 ATATTCTTTTAGCTCATTAAACTCACGTACCGTTTTATAGAAAATCGGTATCGTGTCTTC 20609 ||||| || || | | | | | || | | ||| ||||| || || | ||||| Sbjct 2682 ATATTTCTTAAGGGGAGCATAATTTCTAACAGCGTCATAAAAAATAGGGATAGCTTCTTC 2741 Query 20610 TTCGTTAAAAACTGGAACGACAAGAGAGATTTTCAT 20645 ||| |||||||| ||||| | ||||| |||||||| Sbjct 2742 TTCATTAAAAACAGGAACAATTAGAGATATTTTCAT 2777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133395101787784