Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq34 102 6e-17 seq32 102 6e-17 >seq34 Length=123199 Score = 102 bits (112), Expect = 6e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168 || ||||||| ||| || ||||||||||| ||||| |||||||| || || || || | | Sbjct 109587 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGAT 109646 Query 45169 CA-GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | |||| ||||| |||||||| || || || | | ||| || || |||| Sbjct 109647 AATGTT--CTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 109704 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | || || ||||| ||| ||| || || | | ||| ||| | || | Sbjct 109705 GAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTA 109764 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 109765 CCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 102 bits (112), Expect = 6e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168 || ||||||| ||| || ||||||||||| ||||| |||||||| || || || || | | Sbjct 13614 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGAT 13555 Query 45169 CA-GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | |||| ||||| |||||||| || || || | | ||| || || |||| Sbjct 13554 AATGTT--CTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 13497 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | || || ||||| ||| ||| || || | | ||| ||| | || | Sbjct 13496 GAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTA 13437 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 13436 CCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 102 bits (112), Expect = 6e-17 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 45110 CCACCTCTCAATCTTAATACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTC-GTT 45168 || ||||||| ||| || ||||||||||| ||||| |||||||| || || || || | | Sbjct 23126 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGAT 23185 Query 45169 CA-GTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAG 45227 | ||| | |||| ||||| |||||||| || || || | | ||| || || |||| Sbjct 23186 AATGTT--CTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 23243 Query 45228 GCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCA 45287 | | || || ||||| ||| ||| || || | | ||| ||| | || | Sbjct 23244 GAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTA 23303 Query 45288 CCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 |||||| ||||| ||||| || ||||| ||||| ||||| || ||||| Sbjct 23304 CCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395074901471302