Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq36 246 3e-60 >seq36 Length=80385 Score = 246 bits (272), Expect = 3e-60 Identities = 599/899 (67%), Gaps = 29/899 (3%) Strand=Plus/Plus Query 13929 CTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATG 13988 || |||| |||||||| || ||||| || |||| | ||||||||||||||||||| Sbjct 37855 CTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTTCCATAAAATCAAATG 37914 Query 13989 GATTTGTTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCCGCAATGA 14048 ||||| | | | | ||||| | |||| | | ||| | |||||| || | | Sbjct 37915 GATTTTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACAGTCTATCTGCCACAA 37974 Query 14049 ACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATAT 14108 | || || || || ||| | | ||||||||| || || | | || || | | | Sbjct 37975 ATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAACTAACTGGTAATGCGT 38034 Query 14109 TGGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCGTAATAATTTCAT 14168 || ||||| ||||||||||| ||| || || |||| || | |||| | Sbjct 38035 CTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCC---ATAACTATGGCTTTAATGCTTT 38091 Query 14169 TAGAAGGAGGA-TATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCC 14227 | | | || | || ||| ||||| ||| |||||||| |||||| ||| Sbjct 38092 TGCACTTATTTCTAATGTACTTGTGTAAAAG----ACATGCAAAATCTGTATGAAGACCC 38147 Query 14228 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 14287 || || || ||||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct 38148 TCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCATCAATCCTCTCTTTTTG 38207 Query 14288 AACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14347 | |||||| |||||||| || || || || || ||||| || || ||||| || Sbjct 38208 AGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTTCTACACACGCAAATGCC 38267 Query 14348 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAt 14407 | ||| |||| || | | | | | ||||| ||| |||||||| | | Sbjct 38268 ACGCATCTCGTGTCAAAAGAAG---TATCGCTTACAATCCACTTTTGTGCCCATTCTGCT 38324 Query 14408 ttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATGTTCCTTCTCTTTAGTA 14467 ||||| ||||| || |||| || |||||||| | || | | ||||||| | Sbjct 38325 TTTTTCTTAATTGCTGGTATGTTTTCTATTGCATTAAAAAGATAATTTTGCTCTTTATAA 38384 Query 14468 CTTGA----AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14523 || ||||| | ||||||| || |||||||| || ||||||||||| || Sbjct 38385 TCTGGTACCAATGTTTCTATCAATTTTGAA----TACATTTCTGAATGTATGTTTTCTAT 38440 Query 14524 AGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACC-TCTGAGTAAAATC 14582 || || ||||| || |||||||| | ||||| | || ||| | || |||||| Sbjct 38441 TGCAATTTGAAAGCCGTAAAAACACTTTGCTTCCAAA-ATGGTAACATCATTTGAAAATC 38499 Query 14583 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14642 |||| | ||||||||||| || || ||||| || ||||||||||| | | ||| Sbjct 38500 TTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAAAATGCAAGAACTCTTT 38559 Query 14643 TAATAAAGTATTGCTCTTCATTGCTGAGTTTTTTCCAATCGGCTAAATCCTTAGAAAGAT 14702 | ||||| ||||||| | ||| |||||| || ||| || || || | | Sbjct 38560 TTATAAAAAATTGCTCGTTTTTGTTGAGTTGATTAAAATGCATTATGTCAAAAGTTAAGT 38619 Query 14703 CTACTTCATCAACTGTCCAAAAACTAGCAACAGCTTTTTTATACATTACCCATATTTCTT 14762 ||||||| || || ||||||||| ||| | ||||||||| | |||||||||||| Sbjct 38620 CTACTTCTTCTACAGTCCAAAAAGTAGATTCGTGTTTTTTATAAAAATCCCATATTTCTT 38679 Query 14763 TATATAATATAGGAAAAACTACAAA--TCTTGAAGATGTTTCT--TTAAGAATTGGTTC 14817 |||| ||| ||||| | ||| | ||||| || |||| | ||||| |||||| Sbjct 38680 GATATTGTATTGGAAATAAAACATACCTCTTG----TGATTCTGGTCAAGAAGTGGTTC 38734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482345226182160