Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_003389.1 Length=146454 Score E Sequences producing significant alignments: (Bits) Value seq36 257 2e-63 >seq36 Length=80385 Score = 257 bits (284), Expect = 2e-63 Identities = 561/826 (68%), Gaps = 28/826 (3%) Strand=Plus/Plus Query 11399 TCCATAAAGCTAAAAGGATTATATACATTGAAGACTTTTTCACAACCTAACTCTGTTAAT 11458 |||||||| ||| ||||| | |||| | ||||||| ||||| | ||| Sbjct 37899 TCCATAAAATCAAATGGATTTTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAAC 37958 Query 11459 AATCTATCTGCGACGAATTCTATATACTGAGACATTAAACAACAATTCATACCTATAAGA 11518 | ||||||||| || |||||||| ||||| ||| | ||||||||| || || | | Sbjct 37959 AGTCTATCTGCCACAAATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAA 38018 Query 11519 TCCACCGGAATAGCAACTGTCAAAAACTCCTTTTCTATATTAACCGCATCAATGATTATC 11578 || || | || ||||||||||||| |||||||| | || || || || | ||| Sbjct 38019 CTAACTGGTAATGCGTCTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTATG 38078 Query 11579 GACGTTATAACTTC----CTTAGATGGTGGATGTAATAAATGTTTAAACATTAAACACGC 11634 | | ||| ||| |||| | ||||| | ||| |||| | ||| || Sbjct 38079 G-CTTTAATGCTTTTGCACTTATTTCTA--ATGTACT---TGTGTAAA----AGACATGC 38128 Query 11635 AAAATCACAATGTAAACCTTCGTCTCTACTTATTAGTTCATTAGAAAATGTTAATCCGGG 11694 |||||| ||| | ||| ||||| || || |||||||| |||||||||| ||| || Sbjct 38129 AAAATCTGTATGAAGACCCTCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGG 38188 Query 11695 CATCAATCCTCGtttttttATCCAAAATATAGCAGCAAATGAACCAGAAAAGAATATTCC 11754 ||||||||||| ||||| | |||||| || |||||||| |||||| || || ||||| Sbjct 38189 CATCAATCCTCTCTTTTTGAGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCC 38248 Query 11755 CTCCACAGCTGCAAATGCTACTACTCTT-TCTCCATATACCTTGTTGCTAGATATCCATT 11813 || ||| |||||||| || ||| | || | | | | | ||| ||||| | Sbjct 38249 TTCTACACACGCAAATGCCACGCATCTCGTGTCAAAAGAAGTA-TCGCTTACAATCCACT 38307 Query 11814 TTCTGGCCCAATCAGCTTTCTTTTTTACGCATTCC----ATTGTTTCTATAGCGTTAAAT 11869 || ||||| || ||||| ||| ||| ||| | || ||||||| || ||||| Sbjct 38308 TTTGTGCCCATTCTGCTTT-TTTCTTA---ATTGCTGGTATGTTTTCTATTGCATTAAAA 38363 Query 11870 AAATGCATTTTTTCTATATTATCTCTTACATATGTATCTATTAATAAACTATACATTTCT 11929 | || ||| ||| ||| |||| ||| |||| ||||| ||| |||||||||| Sbjct 38364 AGATAATTTTGCTCTTTATAATCTGGTACCAATGTTTCTATCAATTTTGAATACATTTCT 38423 Query 11930 GAATGAATATTTTCCATAGCTATTTGAAATCCATAGAAACATCGTGCCTCTGAACACTGT 11989 ||||| || ||||| || || |||||||| || || ||||| ||| || || | || Sbjct 38424 GAATGTATGTTTTCTATTGCAATTTGAAAGCCGTAAAAACACTTTGCTTC-CAAAATGGT 38482 Query 11990 -ACATCCACATAAAATCTTTCCGCTAAATTCTCATTTACAATACCATCACTAGATGCAAA 12048 ||||| |||||||||| | |||||| ||||||||||| ||||| | ||||| Sbjct 38483 AACATCATTTGAAAATCTTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAA 38542 Query 12049 AAATGCTAGTATATGTTTTATAAAGTATTTTTCGTCTTTAGTTAATTTATCCCAAT-CAT 12107 |||||| || | ||||||||| ||| |||| ||| | | || || ||| ||| Sbjct 38543 AAATGCAAGAACTCTTTTTATAAAAAATTGCTCGTTTTTGTTGAGTTGATTAAAATGCAT 38602 Query 12108 CTAAATCTTTTGATAAATCTACTTCTTCAACGGTCCAAAAACTTGCCACTGATTGTTTAT 12167 || || | ||| ||||||||||| || ||||||||| | | | || ||||| Sbjct 38603 -TATGTCAAAAGTTAAGTCTACTTCTTCTACAGTCCAAAAAGTAGATTCGTGTTTTTTAT 38661 Query 12168 ACATTTTCCAGATATCATGATACTTAATAGGGAAAATAACGAACCT 12213 | | | ||| || || ||||| | || || || | ||| |||| Sbjct 38662 AAAAATCCCATATTTCTTGATATTGTATTGGAAATAAAACATACCT 38707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468524436893280