Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq36 260 1e-64 >seq36 Length=80385 Score = 260 bits (288), Expect = 1e-64 Identities = 583/869 (67%), Gaps = 21/869 (2%) Strand=Plus/Plus Query 13597 CTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAATG 13656 || |||| |||||||| || ||||| || |||| | ||||||||||||||||||| Sbjct 37855 CTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTTCCATAAAATCAAATG 37914 Query 13657 GATTTATTGACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAATAA 13716 ||||| | | | | ||||| | |||| | | ||| | |||||| || | || Sbjct 37915 GATTTTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACAGTCTATCTGCCACAA 37974 Query 13717 ACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTATAT 13776 | || || || || ||| | | ||||||||| || || | | || || | | | Sbjct 37975 ATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAACTAACTGGTAATGCGT 38034 Query 13777 TGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCTCAT 13836 || ||||| ||||||||||| ||| || || |||| || | |||| | Sbjct 38035 CTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCC---ATAACTATGGCTTTAATGCTTT 38091 Query 13837 TAGAAGGAGGA-TATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCC 13895 | | | || | || ||| ||||| ||| |||||||| |||||| ||| Sbjct 38092 TGCACTTATTTCTAATGTACTTGTGTAAAAG----ACATGCAAAATCTGTATGAAGACCC 38147 Query 13896 TCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttttt 13955 || || || ||||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct 38148 TCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCATCAATCCTCTCTTTTTG 38207 Query 13956 AACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCT 14015 | |||||| ||||||||||| || || || || ||||| || || ||||| || Sbjct 38208 AGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTTCTACACACGCAAATGCC 38267 Query 14016 ATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAGAt 14075 | ||| |||| || | | | | | ||||| ||| |||||||| | | Sbjct 38268 ACGCATCTCGTGTCAAAAGAAG---TATCGCTTACAATCCACTTTTGTGCCCATTCTGCT 38324 Query 14076 ttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTCCTTCTCTTTAGTA 14135 ||||| ||||| || |||| || |||||||| | ||| | | ||||||| | Sbjct 38325 TTTTTCTTAATTGCTGGTATGTTTTCTATTGCATTAAAAAGATAATTTTGCTCTTTATAA 38384 Query 14136 CTTGA----AATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCAT 14191 || ||||| | ||||||| || |||||||| || ||||||||||| || Sbjct 38385 TCTGGTACCAATGTTTCTATCAATTTTGAA----TACATTTCTGAATGTATGTTTTCTAT 38440 Query 14192 AGCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTA-CTTCCGAGTAAAATC 14250 || || ||||| || ||||| || | |||||| | || ||| | || |||||| Sbjct 38441 TGCAATTTGAAAGCCGTAAAAACACTTTGCTTCCAAA-ATGGTAACATCATTTGAAAATC 38499 Query 14251 TTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTT 14310 |||| | ||||||||||| || || ||||| || ||||||||||| | | ||| Sbjct 38500 TTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAAAATGCAAGAACTCTTT 38559 Query 14311 TAATAAAGTATTGCTCTTCATTGTTGAGTTTTTTCCAATCGGATAAATCCTTAGAAAGAT 14370 | ||||| ||||||| | |||||||||| || ||| || || || | | Sbjct 38560 TTATAAAAAATTGCTCGTTTTTGTTGAGTTGATTAAAATGCATTATGTCAAAAGTTAAGT 38619 Query 14371 CTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATATTTCTT 14430 ||||||| || || ||||||||| ||| | ||||||||| | |||||||||||| Sbjct 38620 CTACTTCTTCTACAGTCCAAAAAGTAGATTCGTGTTTTTTATAAAAATCCCATATTTCTT 38679 Query 14431 TATATAATATAGGAAAAACTACAAATCTC 14459 |||| ||| ||||| | ||| | ||| Sbjct 38680 GATATTGTATTGGAAATAAAACATACCTC 38708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727628210800