Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq34 109 4e-19 seq32 109 4e-19 >seq34 Length=123199 Score = 109 bits (120), Expect = 4e-19 Identities = 175/248 (71%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| ||| ||||| || || || ||| || || || || || ||||| | Sbjct 109587 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGAT 109646 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| | ||||| || || | || | | || || || ||| Sbjct 109647 AATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGA 109706 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| ||| |||||| || ||| |||| ||| |||| ||||||| Sbjct 109707 ATTCCTTCTTTGTCTTGAATCTTTGCT-TTGACATTTTCAATGCTATCCGAGCTTTCTAC 109765 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375 || || ||||| || ||||| ||||| || |||||||| || |||||| | ||| Sbjct 109766 CTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATAAGGG---GTAA 109822 Query 15376 AATTTTAA 15383 |||||||| Sbjct 109823 AATTTTAA 109830 >seq32 Length=103007 Score = 109 bits (120), Expect = 4e-19 Identities = 175/248 (71%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| ||| ||||| || || || ||| || || || || || ||||| | Sbjct 13614 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGAT 13555 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| | ||||| || || | || | | || || || ||| Sbjct 13554 AATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGA 13495 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| ||| |||||| || ||| |||| ||| |||| ||||||| Sbjct 13494 ATTCCTTCTTTGTCTTGAATCTTTGCT-TTGACATTTTCAATGCTATCCGAGCTTTCTAC 13436 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375 || || ||||| || ||||| ||||| || |||||||| || |||||| | ||| Sbjct 13435 CTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATAAGGG---GTAA 13379 Query 15376 AATTTTAA 15383 |||||||| Sbjct 13378 AATTTTAA 13371 Score = 109 bits (120), Expect = 4e-19 Identities = 175/248 (71%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||||| ||| ||||| || || || ||| || || || || || ||||| | Sbjct 23126 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGAT 23185 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | |||| ||||||| | ||||| || || | || | | || || || ||| Sbjct 23186 AATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGA 23245 Query 15257 ATTCCTTCTTTGTCACAAAT-TTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 |||||||||||||| ||| |||||| || ||| |||| ||| |||| ||||||| Sbjct 23246 ATTCCTTCTTTGTCTTGAATCTTTGCT-TTGACATTTTCAATGCTATCCGAGCTTTCTAC 23304 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAA 15375 || || ||||| || ||||| ||||| || |||||||| || |||||| | ||| Sbjct 23305 CTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATAAGGG---GTAA 23361 Query 15376 AATTTTAA 15383 |||||||| Sbjct 23362 AATTTTAA 23369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178926328342