Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq34 91.5 1e-13 seq32 91.5 1e-13 >seq34 Length=123199 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 18811 TTTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATC 18870 ||||||||||| || || || |||| ||||| || ||||| || ||||| ||||| Sbjct 109583 TTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC 109642 Query 18871 CGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCAC 18930 | | |||| | |||| ||||||||||| || ||| |||||||||||||||| || Sbjct 109643 TGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGG 109702 Query 18931 GGGCACGCCCTCTTTGTC 18948 || | || |||||||| Sbjct 109703 AGGAATTCCTTCTTTGTC 109720 >seq32 Length=103007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 18811 TTTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATC 18870 ||||||||||| || || || |||| ||||| || ||||| || ||||| ||||| Sbjct 13618 TTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC 13559 Query 18871 CGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCAC 18930 | | |||| | |||| ||||||||||| || ||| |||||||||||||||| || Sbjct 13558 TGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGG 13499 Query 18931 GGGCACGCCCTCTTTGTC 18948 || | || |||||||| Sbjct 13498 AGGAATTCCTTCTTTGTC 13481 Score = 91.5 bits (100), Expect = 1e-13 Identities = 103/138 (75%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 18811 TTTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATC 18870 ||||||||||| || || || |||| ||||| || ||||| || ||||| ||||| Sbjct 23122 TTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC 23181 Query 18871 CGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCAC 18930 | | |||| | |||| ||||||||||| || ||| |||||||||||||||| || Sbjct 23182 TGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGG 23241 Query 18931 GGGCACGCCCTCTTTGTC 18948 || | || |||||||| Sbjct 23242 AGGAATTCCTTCTTTGTC 23259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572486738428