Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq36 284 1e-71 >seq36 Length=80385 Score = 284 bits (314), Expect = 1e-71 Identities = 507/728 (70%), Gaps = 19/728 (3%) Strand=Plus/Plus Query 12859 TTTTTGATA-TTCGCTAACTCTTTTTTCAAAAAAGTTTGTTTTTCCTTCTAACGAAATAT 12917 ||| ||||| || ||| || |||| ||||| || ||||||||||| || || | | Sbjct 37838 TTTCTGATAATTTGCTT-CTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGT 37896 Query 12918 TTTCCATAAAATCGAAAGGATTTTTCGAACAATAGTATTTTTTACAC-CCTAATTCTAGT 12976 ||||||||||||| || |||||||||| | || || ||||| | | |||||| | | Sbjct 37897 TTTCCATAAAATCAAATGGATTTTTCGTATTGTA-TACTTTTTGCTCTCCTAATGCATAT 37955 Query 12977 AACAATCTGTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATT 13036 |||| ||| || || ||||| |||||||||||| ||| | | ||| |||||||| || Sbjct 37956 AACAGTCTATCTGCCACAAATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATC 38015 Query 13037 AATTTTACAGGCATAGCTTCTGTTAAAAAGtttttttCTATATCAACTGCTTCGATAACT 13096 || | || || | || ||||| ||||| | ||||||||| || |||||||| |||||| Sbjct 38016 AAACTAACTGGTAATGCGTCTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACT 38075 Query 13097 ATGTCTCTTATTACGTT--CTCTAATGGAGGATTTGATAGATGCTTAAACATCATACATG 13154 ||| || ||| | | || | || || || || || |||| | ||||| Sbjct 38076 ATGGCT-TTAATGCTTTTGCACTTATTTCTAAT---GTACTTGTGTAAA----AGACATG 38127 Query 13155 CAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCG 13214 ||||||| || | || || || || || || || |||||||||||||| || | Sbjct 38128 CAAAATCTGTATGAAGACCCTCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTG 38187 Query 13215 GCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTC 13274 |||| | |||| ||||| | |||||| || |||||||| ||||| ||||| |||| Sbjct 38188 GCATCAATCCTCTCTTTTTGAGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTC 38247 Query 13275 CTTCAACTGCTGCAAACGCTATCAACCTTTCACCATACGTACTATTTTTACTCTCTATCC 13334 |||| || ||||| || | | || || | | | || | || | |||| Sbjct 38248 CTTCTACACACGCAAATGCCACGCATCTCGTGTCAAAAGAAGTA---TCGCTTACAATCC 38304 Query 13335 ACTTTCTGGCCCAGTTTGCTTTTTGTTTAA-CGCAGTTCATATTTTCTATTGCGTTAAAT 13393 ||||| ||||| | |||||||| |||| || | | || ||||||||||| ||||| Sbjct 38305 ACTTTTGTGCCCATTCTGCTTTTTTCTTAATTGCTGGT-ATGTTTTCTATTGCATTAAAA 38363 Query 13394 AAATAAtttttttCCTTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCT 13453 | |||||||| || ||| ||| | | || ||||||||| |||||||||| Sbjct 38364 AGATAATTTTGCTCTTTATAATCTGGTACCAATGTTTCTATCAATTTTGAATACATTTCT 38423 Query 13454 GAATGAATATTTTCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGA 13513 ||||| || ||||| || || ||||| || || |||||||| | || || | | | Sbjct 38424 GAATGTATGTTTTCTATTGCAATTTGAAAGCCGTAAAAACACTTTGCTTCCAAAATGGTA 38483 Query 13514 ACTTCGGAGTAAAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaa 13573 || || |||||||||||| ||| ||||| || || || || || ||||||||| Sbjct 38484 ACATCATTTGAAAATCTTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAA 38543 Query 13574 aaaGCAAG 13581 || ||||| Sbjct 38544 AATGCAAG 38551 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430982074338924