Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq34 208 2e-48 seq32 208 2e-48 >seq34 Length=123199 Score = 208 bits (230), Expect = 2e-48 Identities = 190/237 (80%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 || ||| |||| ||||| || || | || | || | ||| ||| ||||| |||||| Sbjct 109578 TTCTTTTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTA 109637 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || || |||| ||||| |||||||| || |||||||| |||||||| || ||||| || Sbjct 109638 TAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGC 109697 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 |||||||| ||||||||||| || |||||||||||||| |||||||| | | |||| | | Sbjct 109698 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATC-CGA 109756 Query 104504 G-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||||||| | ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct 109757 GCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 208 bits (230), Expect = 2e-48 Identities = 190/237 (80%), Gaps = 2/237 (1%) Strand=Plus/Minus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 || ||| |||| ||||| || || | || | || | ||| ||| ||||| |||||| Sbjct 13623 TTCTTTTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTA 13564 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || || |||| ||||| |||||||| || |||||||| |||||||| || ||||| || Sbjct 13563 TAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGC 13504 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 |||||||| ||||||||||| || |||||||||||||| |||||||| | | |||| | | Sbjct 13503 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATC-CGA 13445 Query 104504 GGTT-CTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | || ||||||| | ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct 13444 GCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 208 bits (230), Expect = 2e-48 Identities = 190/237 (80%), Gaps = 2/237 (1%) Strand=Plus/Plus Query 104324 TTATTTATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTA 104383 || ||| |||| ||||| || || | || | || | ||| ||| ||||| |||||| Sbjct 23117 TTCTTTTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTA 23176 Query 104384 TAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGA 104443 || || |||| ||||| |||||||| || |||||||| |||||||| || ||||| || Sbjct 23177 TAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGC 23236 Query 104444 TCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTA 104503 |||||||| ||||||||||| || |||||||||||||| |||||||| | | |||| | | Sbjct 23237 TCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATC-CGA 23295 Query 104504 G-GTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 | ||||||||| | ||||| ||||||||||| ||||| ||||||||||||||||| Sbjct 23296 GCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151397485357896