Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq29 122 2e-22 seq36 102 2e-16 >seq29 Length=110338 Score = 122 bits (134), Expect = 2e-22 Identities = 306/460 (67%), Gaps = 4/460 (1%) Strand=Plus/Plus Query 111483 GAAGAAGGTGATCTCGGACCAGTTTACGGATTTCAATGGCGCCACTTTGGTGCAGACTAC 111542 |||| | ||| || ||||| ||||| || ||||| ||| | || | ||||||| || Sbjct 17371 GAAGCAAATGACCTGGGACCTGTTTATGGCTTTCAGTGGAGACATTATGGTGCACCATAT 17430 Query 111543 AAAACCATGCACGACTCAT-ATGATTCACAGGGAACTGATCAATTACAGAATGTCATTGA 111601 |||| |||| ||| || | || | |||||| |||||| | | |||| ||||| Sbjct 17431 GAAACG-TGCAAGACAAATTACGAAGGAAAGGGAATTGATCAGCTTAGGGATGTTATTGA 17489 Query 111602 TCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAAATGC 111661 |||||||||| || ||||| | | | ||| || |||| ||||| || | | Sbjct 17490 GCAAATTAAGACAAATCCAACCAGCAGAAGACTGATTGTGTGTGCGTGGAATCCTT-TAC 17548 Query 111662 ATTGGAAA-AAATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTACACGACG 111720 | || |||||||||||||||| |||||| | | | || ||| | || | | Sbjct 17549 AGCTTAAGGAAATGGCACTTCCACCGTGTCATACTTTATTTCACTTTAAGGTGTATGGTA 17608 Query 111721 GGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTCCGTTTA 111780 | | | ||| |||| || |||| | |||| ||||| | |||||||| |||| Sbjct 17609 ACAAGTTAAGCTGCATTCTGTACCAAAGATCAGGTGATGTTGGTTTGGGTGTTCCTTTTA 17668 Query 111781 ATATTGCAAGTTACGCACTACTTACTTGCTTAATCGCTCATTTTACAAATCTCAAACCGG 111840 | ||||||||||| || | ||||| | | || | || |||||||| |||| Sbjct 17669 ACATTGCAAGTTATGCTTTGCTTACGATAATTGTGGCAAAATTAACAAATCTAGAACCTA 17728 Query 111841 GTGAATTCATTCACGTTATCGGAGATGCGCATGTTTACACAAACCACATTGATGCACTTA 111900 ||||||| ||||| |||| ||||| |||| ||||||| | ||| |||| || | | Sbjct 17729 GTGAATTTATTCATTTTATAGGAGACACGCACGTTTACAAGGATCACGTTGAACCATTGA 17788 Query 111901 AAACACAGTTGAAGCGCAAACCATACGATTTCCCAACGAT 111940 || || || | | |||| | |||||||| | ||| Sbjct 17789 AAGAGCAACTGGACAGAGAACCTTTTGATTTCCCTAAGAT 17828 >seq36 Length=80385 Score = 102 bits (112), Expect = 2e-16 Identities = 111/145 (77%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 22501 GCATTTGCTGTG-GTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCT 22559 |||||||| ||| || ||||| ||||| || ||| | ||| |||||| |||||||| Sbjct 38266 GCATTTGC-GTGTGTAGAAGGAATTTTTTTCAGTGGTTCTTTTGCTGCAATTTTTTGGCT 38208 Query 22560 aaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGA 22619 ||||| | | | | ||||| || ||||| ||||||||||| | ||| | | || || Sbjct 38207 CAAAAAGAGAGGATTGATGCCAGGACTAACATTTTCAAATGAACTTATTTCCAGGGACGA 38148 Query 22620 GGGTCTTCATACCGATTTTGCGTGT 22644 |||||||||||| |||||||| ||| Sbjct 38147 GGGTCTTCATACAGATTTTGCATGT 38123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352564648484