Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq34 100 2e-16 seq32 100 2e-16 >seq34 Length=123199 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | |||||||| ||| | ||||| || | ||||| | || || || | Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||| || | |||||| ||||||| ||||||||||| || ||||| || || Sbjct 109753 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 109694 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||||| |||| | || || || || ||||| | |||| | | | | |||||||| Sbjct 109693 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAA-CATTATCAGATTATAA 109635 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || ||| ||| | || || || || ||| ||||||||||| Sbjct 109634 TATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGA 109586 >seq32 Length=103007 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | |||||||| ||| | ||||| || | ||||| | || || || | Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||| || | |||||| ||||||| ||||||||||| || ||||| || || Sbjct 13448 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 13507 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||||| |||| | || || || || ||||| | || ||| | | | |||||||| Sbjct 13508 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAG-AACATTATCAGATTATAA 13566 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || ||| ||| | || || || || ||| ||||||||||| Sbjct 13567 TATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGA 13615 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | |||||||| ||| | ||||| || | ||||| | || || || | Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 || | ||| || | |||||| ||||||| ||||||||||| || ||||| || || Sbjct 23292 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 23233 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGC-GATTATAA 24169 |||||||| |||| | || || || || ||||| | |||| | | | | |||||||| Sbjct 23232 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAA-CATTATCAGATTATAA 23174 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 || || || ||| ||| | || || || || ||| ||||||||||| Sbjct 23173 TATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGA 23125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429935675129610