Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_008168.1 Length=104710 Score E Sequences producing significant alignments: (Bits) Value seq34 104 2e-17 seq32 104 2e-17 seq37 86.0 4e-12 seq35 86.0 4e-12 seq24 86.0 4e-12 seq23 86.0 4e-12 >seq34 Length=123199 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || || ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||||| Sbjct 109584 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 109643 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || || | | |||| || | |||||||| ||||| || || | || || || | Sbjct 109644 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 109703 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||||||||||| ||| ||| || ||||| | | |||| ||||| Sbjct 109704 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCT 109763 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || ||||| |||| || || || ||||||||||| Sbjct 109764 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || || ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||||| Sbjct 13617 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 13558 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || || | | |||| || | |||||||| ||||| || || | || || || | Sbjct 13557 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 13498 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||||||||||| ||| ||| || ||||| | | |||| ||||| Sbjct 13497 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCT 13438 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || ||||| |||| || || || ||||||||||| Sbjct 13437 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 38088 TTACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147 || || ||||||| | ||| ||||| || || ||||| ||||| || ||||| ||||| Sbjct 23123 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 23182 Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207 || || | | |||| || | |||||||| ||||| || || | || || || | Sbjct 23183 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 23242 Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267 || | ||||||||||| ||| ||| || ||||| | | |||| ||||| Sbjct 23243 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCT 23302 Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317 || || || ||||| || ||||| |||| || || || ||||||||||| Sbjct 23303 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||| | |||| ||||| || |||||||| Sbjct 71015 AAGCCCGTTCCCTTGGCTGTTGGTTCGCAAAGCAGTAAGTAGGGACAGTGGGAATCTCGT 71074 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||||||||| ||||||||| ||||| Sbjct 71075 TGCTCCATTCATGCGCGTCGCTAATTAGACGACGA 71109 >seq37 Length=76196 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||| | |||| ||||| || |||||||| Sbjct 73564 AAGCCCGTTCCCTTGGCTGTTGGTTCGCAAAGCAGTAAGTAGGGACAGTGGGAATCTCGT 73505 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||||||||| ||||||||| ||||| Sbjct 73504 TGCTCCATTCATGCGCGTCGCTAATTAGACGACGA 73470 >seq35 Length=128636 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||| | |||| ||||| || |||||||| Sbjct 4401 AAGCCCGTTCCCTTGGCTGTTGGTTCGCAAAGCAGTAAGTAGGGACAGTGGGAATCTCGT 4342 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||||||||| ||||||||| ||||| Sbjct 4341 TGCTCCATTCATGCGCGTCGCTAATTAGACGACGA 4307 >seq24 Length=154466 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Minus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||| | |||| ||||| || |||||||| Sbjct 50326 AAGCCCGTTCCCTTGGCTGTTGGTTCGCAAAGCAGTAAGTAGGGACAGTGGGAATCTCGT 50267 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||||||||| ||||||||| ||||| Sbjct 50266 TGCTCCATTCATGCGCGTCGCTAATTAGACGACGA 50232 >seq23 Length=240858 Score = 86.0 bits (94), Expect = 4e-12 Identities = 76/95 (80%), Gaps = 5/95 (5%) Strand=Plus/Plus Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956 |||||||||||||||||||| | ||||| | |||| ||||| || |||||||| Sbjct 76661 AAGCCCGTTCCCTTGGCTGTTGGTTCGCAAAGCAGTAAGTAGGGACAGTGGGAATCTCGT 76720 Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991 | ||| |||||||||||| ||||||||| ||||| Sbjct 76721 TGCTCCATTCATGCGCGTCGCTAATTAGACGACGA 76755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 334946946905522