Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq34 96.9 3e-15 seq32 96.9 3e-15 >seq34 Length=123199 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||||||||| |||| ||||| | || || | || || || || Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || | || || |||| ||||||| | ||| ||||||||||| ||||| ||||| Sbjct 109753 GATAGCATTGAAAATGTCA---AAGCAAAGATTCAA-GACAAAGAAGGAATTCCTCCTGA 109698 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| | |||||||||| || ||||| | ||||| | | || | ||||| Sbjct 109697 GCAGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTA 109638 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||| || || ||| ||| || || || || | || || ||||||||||| Sbjct 109637 TAATATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAA 109584 >seq32 Length=103007 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||||||||| |||| ||||| | || || | || || || || Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || | || || |||| ||||||| | ||| ||||||||||| ||||| ||||| Sbjct 13448 GATAGCATTGAAAATGTCA---AAGCAAAGATTCAA-GACAAAGAAGGAATTCCTCCTGA 13503 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| | |||||||||| || ||||| | ||||| | | || | ||||| Sbjct 13504 GCAGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTA 13563 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||| || || ||| ||| || || || || | || || ||||||||||| Sbjct 13564 TAATATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAA 13617 Score = 96.9 bits (106), Expect = 3e-15 Identities = 163/234 (70%), Gaps = 8/234 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| |||||||||||||| |||| ||||| | || || | || || || || Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114 || | || || |||| ||||||| | ||| ||||||||||| ||||| ||||| Sbjct 23292 GATAGCATTGAAAATGTCA---AAGCAAAGATTCAA-GACAAAGAAGGAATTCCTCCTGA 23237 Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174 || ||| | |||||||||| || ||||| | ||||| | | || | ||||| Sbjct 23236 GCAGCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTA 23177 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAA 25228 ||||| || || ||| ||| || || || || | || || ||||||||||| Sbjct 23176 TAATATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAA 23123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327672566530