Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq34 95.1 1e-14 seq32 95.1 1e-14 >seq34 Length=123199 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || ||||| || | ||| | || || |||| | | Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||| | | || || ||||| ||| ||||||||||| || || ||||| || || || Sbjct 109753 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 109694 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || |||||| | || || | || | || ||||| || Sbjct 109693 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 109634 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||| ||| | || || |||||| || || | ||||| Sbjct 109633 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGG 109587 >seq32 Length=103007 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || ||||| || | ||| | || || |||| | | Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||| | | || || ||||| ||| ||||||||||| || || ||||| || || || Sbjct 13448 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 13507 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || |||||| | || || | || | || ||||| || Sbjct 13508 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 13567 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||| ||| | || || |||||| || || | ||||| Sbjct 13568 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGG 13614 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | || ||||| || | ||| | || || |||| | | Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 |||| | | || || ||||| ||| ||||||||||| || || ||||| || || || Sbjct 23292 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 23233 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || | ||||| ||||| || |||||| | || || | || | || ||||| || Sbjct 23232 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 23173 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || ||| ||| | || || |||||| || || | ||||| Sbjct 23172 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGAGG 23126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419727682843030