Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq34 91.5 1e-13 seq32 91.5 1e-13 >seq34 Length=123199 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223 ||||||||||| || || | || ||| || || || || ||||| | | || || | Sbjct 109596 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAAT-GTTCT 109654 Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 ||||| || ||||| || || | || || | ||| || || |||||||| ||||| Sbjct 109655 TCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTC 109714 Query 114284 TTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343 |||||| ||||||| ||| | | ||||| | | || | | ||| || |||| || Sbjct 109715 TTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGT 109774 Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || |||||||| |||||||| Sbjct 109775 AATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223 ||||||||||| || || | || ||| || || || || ||||| | | || || | Sbjct 13605 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAAT-GTTCT 13547 Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 ||||| || ||||| || || | || || | ||| || || |||||||| ||||| Sbjct 13546 TCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTC 13487 Query 114284 TTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343 |||||| ||||||| ||| | | ||||| | | || | | ||| || |||| || Sbjct 13486 TTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGT 13427 Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || |||||||| |||||||| Sbjct 13426 AATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 91.5 bits (100), Expect = 1e-13 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 114165 AGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATC-GCTCATAGTACG 114223 ||||||||||| || || | || ||| || || || || ||||| | | || || | Sbjct 23135 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAAT-GTTCT 23193 Query 114224 AGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTC 114283 ||||| || ||||| || || | || || | ||| || || |||||||| ||||| Sbjct 23194 TCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTC 23253 Query 114284 TTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGT 114343 |||||| ||||||| ||| | | ||||| | | || | | ||| || |||| || Sbjct 23254 TTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGT 23313 Query 114344 CACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 | || || || ||||| || |||||||| |||||||| Sbjct 23314 AATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420134082535944