Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq34 114 3e-20 seq32 114 3e-20 >seq34 Length=123199 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||||||| || ||||||||||| || | | || | ||||||||| | ||||||||| Sbjct 109617 GTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCT 109676 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || || || | ||| || | || ||||||||||| || || || || ||||| Sbjct 109677 GCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTG 109736 Query 288397 ACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || ||| ||| |||||| || | || || ||||| || ||||| Sbjct 109737 ACATTTTCAATGCTATCCGAGCT---TTCTACCTCCAAAGTAATTGTCTTACCAGTCAGT 109793 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| Sbjct 109794 GTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Minus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||||||| || ||||||||||| || | | || | ||||||||| | ||||||||| Sbjct 13584 GTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCT 13525 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || || || | ||| || | || ||||||||||| || || || || ||||| Sbjct 13524 GCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTG 13465 Query 288397 ACGTTTTCTATAGAATCGCTCGA---TTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || ||| ||| |||||| || | || || ||||| || ||||| Sbjct 13464 ACATTTTCAATGCTATC---CGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGT 13408 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| Sbjct 13407 GTCTTTACAAATATCTGCAT 13388 Score = 114 bits (126), Expect = 3e-20 Identities = 146/200 (73%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 288277 GTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCT 288336 |||||||| || ||||||||||| || | | || | ||||||||| | ||||||||| Sbjct 23156 GTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCT 23215 Query 288337 GCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTC 288396 || || || || | ||| || | || ||||||||||| || || || || ||||| Sbjct 23216 GCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTG 23275 Query 288397 ACGTTTTCTATAGAATC---GCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGA 288453 || ||||| || ||| ||| |||||| || | || || ||||| || ||||| Sbjct 23276 ACATTTTCAATGCTATCCGAGCT---TTCTACCTCCAAAGTAATTGTCTTACCAGTCAGT 23332 Query 288454 GTCTTGACGAATATCTGCAT 288473 ||||| || ||||||||||| Sbjct 23333 GTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179653462912036