Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq34 89.7 5e-13 seq32 89.7 5e-13 >seq34 Length=123199 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || || || || ||||||| | || | ||||||| ||||| || || ||| | Sbjct 109622 TTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAA 109681 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAA 64370 ||| || | |||||| || ||||||||||||||||| ||||| | | |||||||| ||| Sbjct 109682 AATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTG-AATCTTTGCTTTGACAT 109740 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | |||| | || || || | ||| | ||||| || |||| || |||| Sbjct 109741 TTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTA 109800 Query 64431 CGAAAATTTGCAT 64443 | || || ||||| Sbjct 109801 CAAATATCTGCAT 109813 >seq32 Length=103007 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || || || || ||||||| | || | ||||||| ||||| || || ||| | Sbjct 13579 TTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAA 13520 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAA 64370 ||| || | |||||| || ||||||||||||||||| ||||| | | |||||||| ||| Sbjct 13519 AATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTG-AATCTTTGCTTTGACAT 13461 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | |||| | || || || | ||| | ||||| || |||| || |||| Sbjct 13460 TTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTA 13401 Query 64431 CGAAAATTTGCAT 64443 | || || ||||| Sbjct 13400 CAAATATCTGCAT 13388 Score = 89.7 bits (98), Expect = 5e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 64252 TTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATA 64311 ||| || || || || ||||||| | || | ||||||| ||||| || || ||| | Sbjct 23161 TTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAA 23220 Query 64312 AATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAA 64370 ||| || | |||||| || ||||||||||||||||| ||||| | | |||||||| ||| Sbjct 23221 AATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTG-AATCTTTGCTTTGACAT 23279 Query 64371 CCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTA 64430 || | |||| | || || || | ||| | ||||| || |||| || |||| Sbjct 23280 TTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTA 23339 Query 64431 CGAAAATTTGCAT 64443 | || || ||||| Sbjct 23340 CAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499644412775280