Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq34 98.7 7e-16 seq32 98.7 7e-16 >seq34 Length=123199 Score = 98.7 bits (108), Expect = 7e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| ||||| || || || || || || || || || ||||| || Sbjct 109587 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC--TG 109644 Query 15010 AGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| ||||||| | ||||| || || | || | | ||| || || | Sbjct 109645 ATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 109704 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||||||||| ||||| ||| ||||| ||| ||| |||| || |||| ||||| Sbjct 109705 GAATTCCTTCTTTGTCTTGAATCTTTGC-TTTGACATTTTCAATGCTATCCGAGCTTTCT 109763 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||| ||||| || |||||||| || |||||| Sbjct 109764 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATA 109814 >seq32 Length=103007 Score = 98.7 bits (108), Expect = 7e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| ||||| || || || || || || || || || ||||| || Sbjct 13614 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC--TG 13557 Query 15010 AGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| ||||||| | ||||| || || | || | | ||| || || | Sbjct 13556 ATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 13497 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||||||||| ||||| ||| ||||| ||| ||| |||| || |||| ||||| Sbjct 13496 GAATTCCTTCTTTGTCTTGAATCTTTGC-TTTGACATTTTCAATGCTATCCGAGCTTTCT 13438 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||| ||||| || |||||||| || |||||| Sbjct 13437 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATA 13387 Score = 98.7 bits (108), Expect = 7e-16 Identities = 163/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || ||| ||||| || || || || || || || || || ||||| || Sbjct 23126 CCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATC--TG 23183 Query 15010 AGAAT--TCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| ||| ||||||| | ||||| || || | || | | ||| || || | Sbjct 23184 ATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAG 23243 Query 15068 GAATTCCTTCCTTGTCACAAAT-TTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCT 15126 |||||||||| ||||| ||| ||||| ||| ||| |||| || |||| ||||| Sbjct 23244 GAATTCCTTCTTTGTCTTGAATCTTTGC-TTTGACATTTTCAATGCTATCCGAGCTTTCT 23302 Query 15127 ACGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || || || ||||| || ||||| ||||| || |||||||| || |||||| Sbjct 23303 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATA 23353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357391729945670