Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq34 105 6e-18 seq32 105 6e-18 >seq34 Length=123199 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 45108 TTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAA 45167 ||| ||||||| | || ||||| || | ||||| || |||||| |||||||||||| Sbjct 109581 TTTTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAA 109640 Query 45168 TCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCC 45227 || | ||| | || |||| ||||||||||| | || | || ||||| || Sbjct 109641 TCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCA 109700 Query 45228 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGAC 45287 || ||||| |||||||| |||||||| ||| ||||| ||| | | | || || Sbjct 109701 GGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTT 109760 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||||| || || || || || || |||||||| || ||||| Sbjct 109761 TCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 45108 TTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAA 45167 ||| ||||||| | || ||||| || | ||||| || |||||| |||||||||||| Sbjct 13620 TTTTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAA 13561 Query 45168 TCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCC 45227 || | ||| | || |||| ||||||||||| | || | || ||||| || Sbjct 13560 TCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCA 13501 Query 45228 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGAC 45287 || ||||| |||||||| |||||||| ||| ||||| ||| | | | || || Sbjct 13500 GGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTT 13441 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||||| || || || || || || |||||||| || ||||| Sbjct 13440 TCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 105 bits (116), Expect = 6e-18 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 45108 TTTATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAA 45167 ||| ||||||| | || ||||| || | ||||| || |||||| |||||||||||| Sbjct 23120 TTTTTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAA 23179 Query 45168 TCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCC 45227 || | ||| | || |||| ||||||||||| | || | || ||||| || Sbjct 23180 TCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCA 23239 Query 45228 GGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGAC 45287 || ||||| |||||||| |||||||| ||| ||||| ||| | | | || || Sbjct 23240 GGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTT 23299 Query 45288 TCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || | ||||| || || || || || || |||||||| || ||||| Sbjct 23300 TCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 452002849697520