Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq34 109 1e-18 seq32 109 1e-18 >seq34 Length=123199 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| || || ||||| |||| || || || | || || ||| Sbjct 109596 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTT 109655 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||||||| ||||| || || || || | |||||| || ||| |||||||||| Sbjct 109656 CCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCT 109715 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||||||| || || ||| | | | || | ||||||| ||||| || Sbjct 109716 TTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTA 109775 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || ||||| || || Sbjct 109776 ATTGTCTTACCAGTCAGTGTCTTTACAAATATCTG 109810 >seq32 Length=103007 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| || || ||||| |||| || || || | || || ||| Sbjct 13605 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTT 13546 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||||||| ||||| || || || || | |||||| || ||| |||||||||| Sbjct 13545 CCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCT 13486 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||||||| || || ||| | | | || | ||||||| ||||| || Sbjct 13485 TTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTA 13426 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || ||||| || || Sbjct 13425 ATTGTCTTACCAGTCAGTGTCTTTACAAATATCTG 13391 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 ||||||| || | ||| || || ||||| |||| || || || | || || ||| Sbjct 23135 AGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTT 23194 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 || ||||||||||| ||||| || || || || | |||||| || ||| |||||||||| Sbjct 23195 CCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCT 23254 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || ||||||||| || || ||| | | | || | ||||||| ||||| || Sbjct 23255 TTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAAAGTA 23314 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || ||||| || || Sbjct 23315 ATTGTCTTACCAGTCAGTGTCTTTACAAATATCTG 23349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178920663494154