Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq34 163 1e-34 seq32 163 1e-34 seq23 91.5 6e-13 seq35 86.0 2e-11 >seq34 Length=123199 Score = 163 bits (180), Expect = 1e-34 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || |||||||||||||| || |||||| | || || ||| || Sbjct 109813 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 109754 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | ||| ||| |||||||| || ||||||||||||||||| || Sbjct 109753 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 109694 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | ||||| |||| ||||| || ||||| |||||||| || | ||||||||| Sbjct 109693 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 109634 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| ||||| ||||| || || |||||||||||| Sbjct 109633 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGA 109589 >seq32 Length=103007 Score = 163 bits (180), Expect = 1e-34 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || |||||||||||||| || |||||| | || || ||| || Sbjct 13388 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 13447 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | ||| ||| |||||||| || ||||||||||||||||| || Sbjct 13448 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 13507 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | ||||| |||| ||||| || ||||| |||||||| || | ||||||||| Sbjct 13508 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 13567 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| ||||| ||||| || || |||||||||||| Sbjct 13568 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGA 13612 Score = 163 bits (180), Expect = 1e-34 Identities = 171/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || |||||||||||||| || |||||| | || || ||| || Sbjct 23352 ATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTCG 23293 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||||| | | ||| ||| |||||||| || ||||||||||||||||| || Sbjct 23292 GATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAG 23233 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | ||||| |||| ||||| || ||||| |||||||| || | ||||||||| Sbjct 23232 CAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAAT 23173 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| ||||| ||||| || || |||||||||||| Sbjct 23172 ATCCAGAAGGAAAGCACACTGCACTTGGTTTTGAGACTGAGAGGA 23128 >seq23 Length=240858 Score = 91.5 bits (100), Expect = 6e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 || |||||||| ||||| || ||||| || ||| ||||| | || | ||||||| ||||| Sbjct 168180 GCGGTAATTACAGTTCCTGCGTATTTTAACGATTCACAAAGACAGGAAACTAAAAATGCA 168239 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 ||| | || || || ||||| || | |||| || ||||| || ||||| || ||| Sbjct 168240 GGAAAGCAAGCGGGCATAGATGTTGTTAGGGTTATAAACGAACCAACGGCAGCAGCACTA 168299 Query 451442 GCATATGG 451449 |||||||| Sbjct 168300 GCATATGG 168307 >seq35 Length=128636 Score = 86.0 bits (94), Expect = 2e-11 Identities = 196/292 (67%), Gaps = 11/292 (4%) Strand=Plus/Minus Query 364565 TATTCCATCTTTAGTTGATGGATTTAAACCTTCTCAAAGAAAA---ATTTTTT-ATGGAG 364620 |||||| ||| || | ||||| || || ||| |||||||||| ||||||| ||| Sbjct 43831 TATTCCTTCTGTAATCGATGGTTTAAAGCCTGGTCAAAGAAAAGTTATTTTTTCATGT-- 43774 Query 364621 CAAATTTAAGAGGATTAGAAAAAGATCAAGTAAAAGTAGCTCAATTAGCAGGTTTTGTAT 364680 ||||| || | | || || || || |||||||||| || ||| ||||| ||| | Sbjct 43773 ----TTTAAAAGAAATTTAAGAA-ATGAAATAAAAGTAGCACAGCTAGTAGGTTATGTTT 43719 Query 364681 CTGACCGGGTAGCTTATCATCACGGTGAGGCAAGTTTAATGGGAGCAATAATTGGAATGG 364740 | || | || |||||||||||||| ||| ||| | |||| || | | Sbjct 43718 CAGAACACTCTGCATATCATCACGGTGAAGCATCGTTATCATCAACAATTATCAATTTAG 43659 Query 364741 CACAAAATTTTGTTGGAAGTAATAATGTAAATTTACTAGAACCAAAAGGACAATTTGGAA 364800 | || | ||||| || || || || ||||||| || ||||| || |||||||| Sbjct 43658 CGCATGACTTTGTAGGGAGCAACAACATAAATTTGCTTTTACCAATTGGTCAATTTGGTT 43599 Query 364801 GTCGAGTAATGGGAGGTAAAGATTCTGCCAGCCCACGTTATATTTGGACCAA 364852 | || | |||| ||||||||| |||| || | || |||| ||||| Sbjct 43598 CTAGACTTTTGGGGGGTAAAGATAGTGCCTCTCCGAGGTACATTTTTACCAA 43547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975716830538696