Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq35 102 6e-16 seq36 95.1 9e-14 seq23 91.5 1e-12 >seq35 Length=128636 Score = 102 bits (112), Expect = 6e-16 Identities = 240/355 (68%), Gaps = 7/355 (2%) Strand=Plus/Minus Query 635416 GGCAGGAACCAAAGAAGGATATAAATGTACCCTAATTTTGACAGAGGGAGATTCAGCTAA 635475 ||||||||| ||| | | | |||| || || ||||||||||| || ||||| || || Sbjct 44599 GGCAGGAACAAAAAAGAGTTCCGAATGCACACTTATTTTGACAGAAGGTGATTCTGCAAA 44540 Query 635476 AACATTCGCTATGTCTGGTCTTAATGTTATTGGAAGAGATTATTATGGAGTTTTCCCACT 635535 |||||| || | | ||| | | || |||| ||||| | ||||| || || ||| | Sbjct 44539 AACATTGGCAGTTGCAGGTTTAAGCGTCGTTGGTAGAGACAAGTATGGTGTGTTTCCATT 44480 Query 635536 TAGAGGAAAACTTTTGAATGTTAGGGATGCTAGTCCTaaaa--aaaTTGCTGATAATGAG 635593 | || || || | ||||| ||||| || || | | || |||| || |||| Sbjct 44479 ACGTGGTAAGCTGCTAAATGTGAGGGAAGC-AG-CAAACAAGCAAATAATGGAGAATGCA 44422 Query 635594 GAAATTACAGCAATCaaaaaaaTTGTTGGACTTGAACAAGGAAAAGTTTATGATGA-TCT 635652 ||||| | ||||| |||||||| | ||||| |||| || ||| ||| || || Sbjct 44421 GAAATAAGCGCAATTAAAAAAATATTAGGACTGCAACATGGCAAAACATATTCAGACACT 44362 Query 635653 CAAAGGTTTACGATATGGTAGTATTATGATTCTTGCTGATCAAGATGTTGATGGGTACCA 635712 | ||| ||||||| || ||||| | | ||||| ||| ||||||| | || Sbjct 44361 TCCACTCTTA-GATATGGGCACATAATGATAATGACAGATCAGGATTTTGATGGTTCTCA 44303 Query 635713 TATCAAAGGATTAATCATGAATTTTATCCATTGTTTTTGGCCATCTCTCGTTAAA 635767 || |||||||| || || |||||| | || ||||| || || ||| ||||| Sbjct 44302 CATTAAAGGATTGATAATTAATTTTTTAGATCATTTTTTCCCTTCCCTC-TTAAA 44249 >seq36 Length=80385 Score = 95.1 bits (104), Expect = 9e-14 Identities = 266/400 (67%), Gaps = 14/400 (4%) Strand=Plus/Plus Query 397210 AATAAATTGATTTGATATAATTAGACCAGGCATTACATGCATTTCTCTAGTTTTTAACCA 397269 ||||| || |||||| | |||| || ||||| | || | ||||| |||| | ||| Sbjct 38159 AATAAGTTCATTTGAAAATGTTAGTCCTGGCATCA-ATCC---TCTCT--TTTTGAGCCA 38212 Query 397270 GAAAATCGAAGCAAATGATCCACTAAAGAAAACGCCTTCTACAATAGAGAATGCTACTAA 397329 ||||| | |||||| || ||||| || |||| ||||||||| | ||||| || | Sbjct 38213 AAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTTCTACACACGCAAATGCCACGCA 38272 Query 397330 TTT-GTGAGCATAAGTCTTATCAGATTTAATCCATTTATTACACCAATCAGCTTTCTTTT 397388 | | ||| || ||| |||| | |||||| || | ||| || ||||| || | Sbjct 38273 TCTCGTGT-CAAAAGAAGTATCGCTTACAATCCACTTTTGTGCCCATTCTGCTTTTTTCT 38331 Query 397389 TAATACTTGGCATAGTTTTAATAGAATTAATGAGTTTATTTCTCAAAGCATCATCTTTAA 397448 |||| ||| || ||| || | ||||| || | |||| | || |||| | Sbjct 38332 TAATTGCTGGTATGTTTTCTATTGCATTAAAAAGATAATTTTGCTCTTTATAATCTGGTA 38391 Query 397449 CAAATGTAGTCAACATTAGTGAATACATTTCTCCATGAGCATTTTCCATTGCATATTGGA 397508 | ||||| | || | ||||||||||||| ||| ||||| |||||| ||| | Sbjct 38392 CCAATGTTTCTATCAATTTTGAATACATTTCTGAATGTATGTTTTCTATTGCAATTTGAA 38451 Query 397509 AACCATAAGCACATTCAGCTTCTTTTATTTTCACAACATCAAT--AAGAT-TTTCTTTAA 397565 | || ||| ||| | ||||| || | ||||||| | || || ||||| | Sbjct 38452 AGCCGTAAAAACACTTTGCTTCCAAAATGGT---AACATCATTTGAAAATCTTTCTGATA 38508 Query 397566 TATTAGCATTAACAATACCATCAGCTGCCGCAAAAAATGC 397605 ||| |||| ||||| ||||| | ||| ||||||||||| Sbjct 38509 AATTTTCATTTACAATTCCATCTGATGCAGCAAAAAATGC 38548 >seq23 Length=240858 Score = 91.5 bits (100), Expect = 1e-12 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 ||||| || | || || || |||||||| || |||| || | ||||| | || || Sbjct 168307 CCATATGCTAGTGCTGCTGCCGTTGGTTCGTTTATAACCCTAACAACATCTATGCCCGCT 168248 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 518296 ||||||||| |||||| | ||||||||||||||||||||||| |||||||| ||| Sbjct 168247 TGCTTTCCTGCATTTTTAGTTTCCTGTCTTTGTGAATCGTTAAAATACGCAGGAACTGTA 168188 Query 518297 ATAACGGC 518304 || || || Sbjct 168187 ATTACCGC 168180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780819323355772