Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq35 114 2e-20 >seq35 Length=128636 Score = 114 bits (126), Expect = 2e-20 Identities = 281/421 (67%), Gaps = 4/421 (1%) Strand=Plus/Plus Query 183161 CCGGTACCAATACCTTCAGTTCCATTTACCAAAACGGTCGGTAATATAGGAACATAATAG 183220 || || ||||| |||||||||||||||| ||||||| ||||| || || |||||||| Sbjct 43397 CCAGTCCCAATTCCTTCAGTTCCATTTATCAAAACGAGTGGTAAAATCGGCACATAATAT 43456 Query 183221 TCAGGTTCGATTTGTTTACCGTCGTC-GTCGAGATAGTTTAATACTGGATCATCTTTGGG 183279 | || || |||| | || || ||| | | | |||||||||| ||| | Sbjct 43457 ACTGGCTCAATTTTCATGTTATCTTCTGTCT-GTTCTTGTAATACTGGAATATCGTGTTC 43515 Query 183280 ATCAAAAAGTATTCTCGCGTTTTTAGTCAATTTTGTAAATATATACCTGGTTTGACTCGC 183339 || ||||| | ||| | | | | || || ||||| || ||||| | || | | Sbjct 43516 ATGGAAAAGCAATCTTGTAAGTGGATTTAAATTGGTAAAAATGTACCTCGGA-GAGGCAC 43574 Query 183340 G-TCTTTACCACCCATGAGACGTGTACCAAATTGACCACATGGTTCGAGTAAATTAATAT 183398 |||||||| |||| || | | ||||||||||||| |||| || ||||| || | Sbjct 43575 TATCTTTACCCCCCAAAAGTCTAGAACCAAATTGACCAATTGGTAAAAGCAAATTTATGT 43634 Query 183399 TATTCGACCCCGTAAAATTATGTGCTAATTTTACAATTGTATCTGCCAAAGAGACTTCAC 183458 | || ||| ||| | ||| ||||| || | |||||| || || || |||||| Sbjct 43635 TGTTGCTCCCTACAAAGTCATGCGCTAAATTGATAATTGTTGATGATAACGATGCTTCAC 43694 Query 183459 CGTGGTGATACGATGTTTTTTCCGAAACGTATGCGGCTAATTGCGCAACCTTCATTTCAG 183518 |||| ||||| | | | ||| ||||| || | ||| || || || || |||||| Sbjct 43695 CGTGATGATATGCAGAGTGTTCTGAAACATAACCTACTAGCTGTGCTACTTTTATTTCAT 43754 Query 183519 ATGTAAGATTCTTTGTGAAACACGCGTATAACACTTTTCGTTGGGATGGTTTTAAACCAT 183578 | | | ||| || | ||||| | | | ||||||| ||| || |||||||||| Sbjct 43755 TTCTTAAATTTCTTTTAAAACATGAAAAAATAACTTTTCTTTGACCAGGCTTTAAACCAT 43814 Query 183579 C 183579 | Sbjct 43815 C 43815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132307772080