Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq36 84.2 3e-11 >seq36 Length=80385 Score = 84.2 bits (92), Expect = 3e-11 Identities = 275/418 (66%), Gaps = 16/418 (4%) Strand=Plus/Plus Query 117001 TTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAATGGATTC 117060 || |||||||| || || || || || | || | |||||||||||| ||||||||||| Sbjct 37860 TTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTTTCCATAAAATCAAATGGATTT 37919 Query 117061 TTCGCGTTCCAAATGGGTGGCACCCCAACTTGTTTGAGGAGACGATCCGACACATACTCA 117120 |||| || | | | || | || | | | | || | ||| | |||| | || Sbjct 37920 TTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAACAGTCTATCTGCCACAAATTCT 37979 Query 117121 ATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAGATTACATGGGAGTGCGTCCAAG 117180 ||||||| ||| | | | ||||| || || | | || ||| | |||||| Sbjct 37980 ATGTACTGTCCCATAAGGTTACAATTCATTCCAATCAAACTAACTGGTAATGCGTCTGTC 38039 Query 117181 ATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGATAGTTTCGGTAGTG 117240 | ||| |||| || || || || || || | || ||||| | || ||| | | | Sbjct 38040 AAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTATGGCTTTAATGCTTTTGC-ACT- 38097 Query 117241 GGTCTATTACGCAAAGT-CTTG---AAGAGCTCCACGGCAAACTCCTGGTGGAGACCCTC 117296 |||| | || || |||| || || || | |||| || || |||||||| Sbjct 38098 ----TATTTCT-AATGTACTTGTGTAAAAGA--CATG-CAAAATCTGTATGAAGACCCTC 38149 Query 117297 ATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCTTCAA 117356 || | |||||||||||||||||| || ||| |||||||| | || | ||| || | Sbjct 38150 GTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCATCAATCCTCTCTTTTTGAG 38209 Query 117357 CCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGC 117413 |||| |||| || ||| || || || ||| || || || || ||||||||||| || Sbjct 38210 CCAAAAAATTGCAGCA-AAAGAACCACTGAAAAAAATTCCTTCTACACACGCAAATGC 38266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980342764880