Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq34 152 1e-31 seq32 152 1e-31 >seq34 Length=123199 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| | ||| || ||| || || || ||||| ||||| | | || Sbjct 109592 TCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGT 109651 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||| || ||||| || ||||||| || || || |||||||| || Sbjct 109652 TCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCC 109711 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| ||| ||||| || |||||| | ||||| ||||| || || | Sbjct 109712 TTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAA 109771 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || |||| || ||||| || | ||||| Sbjct 109772 AGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| | ||| || ||| || || || ||||| ||||| | | || Sbjct 13609 TCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGT 13550 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||| || ||||| || ||||||| || || || |||||||| || Sbjct 13549 TCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCC 13490 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| ||| ||||| || |||||| | ||||| ||||| || || | Sbjct 13489 TTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAA 13430 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || |||| || ||||| || | ||||| Sbjct 13429 AGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| ||||||||||| | ||| || ||| || || || ||||| ||||| | | || Sbjct 23131 TCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGT 23190 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| || ||||| ||||| || ||||| || ||||||| || || || |||||||| || Sbjct 23191 TCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCC 23250 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||||||||||||||| ||| ||||| || |||||| | ||||| ||||| || || | Sbjct 23251 TTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTACCTCCAA 23310 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 |||| ||||| || |||| || ||||| || | ||||| Sbjct 23311 AGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109480718655554