Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq34 116 2e-21 seq32 116 2e-21 >seq34 Length=123199 Score = 116 bits (128), Expect = 2e-21 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 |||||||| |||| |||||||||||||| | ||||||||| ||||| || ||||| || Sbjct 109584 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 109643 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || | ||| | | || |||||||||||||| ||||| || |||| ||||| || | Sbjct 109644 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 109703 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTAT-CGATTCACCG-GC-C 34928 || | || || ||||| |||||| |||||| | | || | || ||| || Sbjct 109704 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTAT---CCGAGCTT 109760 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | || || || || || || || ||||| ||||| ||||||||| Sbjct 109761 TCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATA 109814 >seq32 Length=103007 Score = 116 bits (128), Expect = 2e-21 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 |||||||| |||| |||||||||||||| | ||||||||| ||||| || ||||| || Sbjct 13617 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 13558 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || | ||| | | || |||||||||||||| ||||| || |||| ||||| || | Sbjct 13557 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 13498 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTAT-CGATTCACCG-GC-C 34928 || | || || ||||| |||||| |||||| | | || | || ||| || Sbjct 13497 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTAT---CCGAGCTT 13441 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | || || || || || || || ||||| ||||| ||||||||| Sbjct 13440 TCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATA 13387 Score = 116 bits (128), Expect = 2e-21 Identities = 169/234 (72%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 34752 TTTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCC 34811 |||||||| |||| |||||||||||||| | ||||||||| ||||| || ||||| || Sbjct 23123 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 23182 Query 34812 GAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGC 34871 || | ||| | | || |||||||||||||| ||||| || |||| ||||| || | Sbjct 23183 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 23242 Query 34872 GGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTAT-CGATTCACCG-GC-C 34928 || | || || ||||| |||||| |||||| | | || | || ||| || Sbjct 23243 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTAT---CCGAGCTT 23299 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | || || || || || || || ||||| ||||| ||||||||| Sbjct 23300 TCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCATA 23353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324633354698736