Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq36 345 5e-90 >seq36 Length=80385 Score = 345 bits (382), Expect = 5e-90 Identities = 629/909 (69%), Gaps = 15/909 (2%) Strand=Plus/Plus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 ||| ||||| | || || |||| ||||||||||| ||||||||||| || | Sbjct 37838 TTTCTGATAATTTGCTTCTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTT 37897 Query 18729 TTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATAG 18788 |||||||||||||||||||||||| ||| |||| ||||| ||||||| | ||| Sbjct 37898 TTCCATAAAATCAAATGGATTTTTCGTATTGTATACTTTTTGCTCTCCTAATGCATATAA 37957 Query 18789 TAGTCTATCCGCTACAAATTTAATATATGTGTTC-ATCATATCACAATTCATTCCTATTA 18847 |||||||| || ||||||| || || ||| | || | | |||||||||||| || | Sbjct 37958 CAGTCTATCTGCCACAAATTCTATGTAC-TGTCCCATAAGGTTACAATTCATTCCAATCA 38016 Query 18848 ATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATAA 18907 | |||| |||| ||| ||||| | ||| |||| |||||| | ||||| || | | Sbjct 38017 AACTAACTGGTAATGCGTCTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTA 38076 Query 18908 TAGATACAACTCTATCTTCA-TTAGGAGGGTATAGAAGATGTTTAAACATCAAACATGCA 18966 | | | || || | | || ||| || | | ||| |||| | ||||||| Sbjct 38077 TGGCTTTAATGCTTT-TGCACTTATTTC--TAATGTACTTGTGTAAA----AGACATGCA 38129 Query 18967 AAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGC 19026 ||||| ||| || |||||||| || || | |||||| |||||||||| || ||| Sbjct 38130 AAATCTGTATGAAGACCCTCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGC 38189 Query 19027 ATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCT 19086 |||| |||||| ||||| | ||| || || | |||||| || ||| || || || ||| Sbjct 38190 ATCAATCCTCTCTTTTTGAGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCT 38249 Query 19087 TCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCAT 19146 ||||| ||||| || || ||| || || || ||| | || |||||| Sbjct 38250 TCTACACACGCAAATGCCACGCATCTCGTGTCAAAAGAAGTATCGCT--TAC-AATCCAC 38306 Query 19147 TTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGA 19206 || ||||||| || || || || || | ||| || | ||||| | |||||| ||| Sbjct 38307 TTTTGTGCCCATTCTGCTTTTTTCTTAATTGCTGGTATGTTTTCTATTGCATTAAAAAGA 38366 Query 19207 TACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAA 19266 || | |||| | |||| || ||| ||||||||| |||||||||||| Sbjct 38367 TAATTTTGCTCTTTATAATCTGGTACCAATGTTTCTATCAATTTTGAATACATTTCTGAA 38426 Query 19267 TGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACT 19326 || || |||||||| || || ||||| ||||||||||| ||||||| || || Sbjct 38427 TGTATGTTTTCTATTGCAATTTGAAAGCCGTAAAAACACTTTGCTTCCAAAATGGTAACA 38486 Query 19327 TCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAAT 19386 ||| | |||||||||| ||||||||||| || |||||||| || ||||||||| Sbjct 38487 TCATTTGAAAATCTTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAAAAT 38546 Query 19387 GCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGTATTCCAAT-CATTAAT 19445 || | || ||| |||||| || || | | | | | | ||| ||| |||| || Sbjct 38547 GCAAGAACTCTTTTTATAAAAAATTGCTCGTTTTTGTTGAGTTGATTAAAATGCATT-AT 38605 Query 19446 ATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACAT 19505 || || ||| ||||||||||| || |||||||||| || || ||||||||| | Sbjct 38606 GTCAAAAGTTAAGTCTACTTCTTCTACAGTCCAAAAAGTAGATTCGTGTTTTTTATAAAA 38665 Query 19506 GTTCCATATATCACGATATTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAG 19565 | |||||| || |||||||||| ||||||| |||| | || || | ||| | | ||| Sbjct 38666 ATCCCATATTTCTTGATATTGTATTGGAAATAAAACATACCTCTTGTGATTCTGGTCAAG 38725 Query 19566 AATAGGTTC 19574 || ||||| Sbjct 38726 AAGTGGTTC 38734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562108364365680