Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq34 129 5e-24 seq32 129 5e-24 >seq34 Length=123199 Score = 129 bits (142), Expect = 5e-24 Identities = 157/210 (75%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || || || ||||| || ||||| ||||| | || |||||| ||||| | Sbjct 109607 CAAG-TGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCA 109665 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | |||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct 109666 GCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAA 109725 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGTAACAGTTTTA 563445 | ||| ||| || ||||| |||| | | | ||| || | ||||| || ||| Sbjct 109726 TCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTAC-CTCCAAAGTAATTGTCTTA 109784 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || || || || |||||| Sbjct 109785 CCAGTCAGTGTCTTTACAAATATCTGCATA 109814 >seq32 Length=103007 Score = 129 bits (142), Expect = 5e-24 Identities = 157/210 (75%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || || || ||||| || ||||| ||||| | || |||||| ||||| | Sbjct 13594 CAAG-TGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCA 13536 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | |||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct 13535 GCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAA 13476 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGTAACAGTTTTA 563445 | ||| ||| || ||||| |||| | | | ||| || | ||||| || ||| Sbjct 13475 TCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTAC-CTCCAAAGTAATTGTCTTA 13417 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || || || || |||||| Sbjct 13416 CCAGTCAGTGTCTTTACAAATATCTGCATA 13387 Score = 129 bits (142), Expect = 5e-24 Identities = 157/210 (75%), Gaps = 3/210 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || || || ||||| || ||||| ||||| | || |||||| ||||| | Sbjct 23146 CAAG-TGCAGTGTGCTTTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCA 23204 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 | |||||||| |||||||||||||| ||||| |||||||||||||||||||| ||||||| Sbjct 23205 GCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAA 23264 Query 563387 TTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGTAACAGTTTTA 563445 | ||| ||| || ||||| |||| | | | ||| || | ||||| || ||| Sbjct 23265 TCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCTAC-CTCCAAAGTAATTGTCTTA 23323 Query 563446 CCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 ||||| || || || || || || |||||| Sbjct 23324 CCAGTCAGTGTCTTTACAAATATCTGCATA 23353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029292721160380