Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq36 241 2e-58 >seq36 Length=80385 Score = 241 bits (266), Expect = 2e-58 Identities = 627/938 (67%), Gaps = 36/938 (4%) Strand=Plus/Plus Query 36827 TTAAAAATCTTCATCTAACGTAAATTTTATTTCCTTATTACTA--TTCATAACTCCCATT 36884 ||||||||| |||| ||| |||| || | || |||| | || | |||| ||| | Sbjct 37784 TTAAAAATCCTCATTTAAATTAAACTTAAAATCATTATCAATACCTACATA--TCC---T 37838 Query 36885 TTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGTGATATATTT 36944 || ||||| | | | || | | || || |||||||| ||||| || | | ||| Sbjct 37839 TTCTGATAATTTGCTTCTTTTTTATCAAAGAAATTTGTTTTTCCCTCCAAACTCAAGTTT 37898 Query 36945 TCCATAAAATCAAATGGATTAGATGTATTATATA--TAGTACTACATGATAATTCCTTCA 37002 |||||||||||||||||||| ||||| |||| | | || | |||| | | | Sbjct 37899 TCCATAAAATCAAATGGATTTTTCGTATTGTATACTTTTTGCTC--TCCTAATGCATATA 37956 Query 37003 GAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATTA 37062 || ||||| || |||||||||||||| | | ||| || | | | || || ||||| | Sbjct 37957 ACAGTCTATCTGCCACAAATTCTATGTACTGTCCCATAAGGTTACAATTCATTCCAATCA 38016 Query 37063 GTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACTA 37122 | ||||| | ||| ||| | ||| |||||||||| || || || |||||| Sbjct 38017 AACTAACTGGTAATGCGTCTGTCAAAAACTCTTTTTCTATTTCCACTGCTTCCATAACTA 38076 Query 37123 TATTAACAATAACTTCTTCAGTTGGGGGATATTTTAAATATTTAAACAATAAACATGCAA 37182 | ||| ||| | || || || | | | || || || | |||||||| Sbjct 38077 TGGCTTTAATG-CTTTTGCACTT-----ATTTCTAATGTACTTGTGTAAAAGACATGCAA 38130 Query 37183 AATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCA 37242 |||| ||| | ||| || || || || | |||||| ||||| |||| |||||||| Sbjct 38131 AATCTGTATGAAGACCCTCGTCCCTGGAAATAAGTTCATTTGAAAATGTTAGTCCTGGCA 38190 Query 37243 TTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTT 37302 | || ||||| ||||| | |||||| ||||| |||||||| ||| || ||||| |||| Sbjct 38191 TCAATCCTCTCTTTTTGAGCCAAAAAATTGCAGCAAAAGAACCACTGAAAAAAATTCCTT 38250 Query 37303 CAACTGCTGCAAATGCTA--CAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCA 37360 | || |||||||| | || ||||| | ||| ||| ||| |||||| Sbjct 38251 CTACACACGCAAATGCCACGCATCTCGTGT--CAAAA---GAAGTATCGCTTACAATCCA 38305 Query 37361 tttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAG 37420 |||| || ||| ||||| ||| |||| | || |||| ||||| || || || Sbjct 38306 CTTTTGTGCCCATTCTGCTTTTTTCTTAATTGCTGGTATGTTTTCTATTGCATTAAAAAG 38365 Query 37421 AAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGA 37480 | | |||| |||| | ||||| || | || || || | | ||||||||| || Sbjct 38366 ATAATTTTGCTCTTTATAATCTGGTACCAATGTTTCTATCAATTTTGAATACATTTCTGA 38425 Query 37481 GTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTG-AA 37539 || || ||||| || || || ||||| || ||||||||| | ||||| | ||| | || Sbjct 38426 ATGTATGTTTTCTATTGCAATTTGAAAGCCGTAAAAACACTTTGCTTC-CAAAATGGTAA 38484 Query 37540 CATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGA 37599 |||| || |||| || | | ||| |||||||| || || ||||| || ||||| | Sbjct 38485 CATCATTTGAAAATCTTTCTGATAAATTTTCATTTACAATTCCATCTGATGCAGCAAAAA 38544 Query 37600 AAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGAT-AATTTTTTCCAAT-CATT 37657 | |||||||| |||||||||| | || | |||| | | || || ||| |||| Sbjct 38545 ATGCAAGAACTCTTTTTATAAAAAATTGCTCGT-TTTTGTTGAGTTGATTAAAATGCATT 38603 Query 37658 AATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAAACTTGCCAATGCACG---TTT 37714 || || | ||| || ||||| || || ||||||||| | | || | | ||| Sbjct 38604 -ATGTCAAAAGTTAAGTCTACTTCTTCTACAGTCCAAAAAGTAG---ATTCGTGTTTTTT 38659 Query 37715 ATACATCGTCCAAATATCATTATGTTGTATTGGAAATA 37752 ||| | ||| || || | || |||||||||||||| Sbjct 38660 ATAAAAATCCCATATTTCTTGATATTGTATTGGAAATA 38697 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592316340954480