Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq36 86.0 1e-11 >seq36 Length=80385 Score = 86.0 bits (94), Expect = 1e-11 Identities = 309/474 (65%), Gaps = 21/474 (4%) Strand=Plus/Minus Query 25569 CAAAGACGAGCAGCATTTTCTCAAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTAT 25628 |||| ||||||| |||| | || || | ||||| ||||| || || ||||| || Sbjct 38582 CAAAAACGAGCAATTTTTTATAAAAAGAGTTCTTGCATTTTTTGCTGCATCAGATGGAAT 38523 Query 25629 AGTGAACGAGAATCTGTGCGAGAGATTCACCAGGGAAGTG--CAGTACGTGGAGGCCAAG 25686 || || || ||| | | || ||||| | | || || || | |||| || ||| Sbjct 38522 TGTAAATGAAAATTTATCAGAAAGATTTTCAAATGATGTTACCATTT--TGGAAGCAAAG 38465 Query 25687 TGTTTCTACGGTTTCCAGATGGCCATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTT 25746 ||||| ||||| || || || || || ||||| | || || || ||||| | || | Sbjct 38464 TGTTTTTACGGCTTTCAAATTGCAATAGAAAACATACATTCAGAAATGTATTCAAAATT- 38406 Query 25747 CTGATGACGTACATTA----CAGACGTCGCCGAGAGAGATCGGCTGTTTGGTGCCATCGA 25802 ||| | ||||| |||| ||| | || || ||| ||| || || Sbjct 38405 --GAT-AGAAACATTGGTACCAGATTATAAAGAGCAAAATTATCTTTTTAATGCAATAGA 38349 Query 25803 GCACATACCCAGCA-TCAAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGA 25861 ||||||| |||| | |||| || || ||||| |||||||| ||| | | Sbjct 38348 AAACATACC-AGCAATTAAGAAAAAAGCAGAATGGGCACAAAAGTGGATTGTAAGCGATA 38290 Query 25862 GCGCTACGTTTGGC--GAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAG 25919 || | |||| | ||| || || || ||||| ||| || || || |||||||| Sbjct 38289 ---CTTCTTTTGACACGAGATGC--GTGGCATTTGCGTGTGTAGAAGGAATTTTTTTCAG 38235 Query 25920 CGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTT 25979 ||||| ||||| || || || |||||||| ||| || ||||| || || || Sbjct 38234 TGGTTCTTTTGCTGCAATTTTTTGGCTCAAAAAGAGAGGATTGATGCCAGGACTAACATT 38175 Query 25980 TTCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACAGAGATTTTGCCTGCCT 26033 ||| || || || || ||||||||||||||| || | ||||||||| || || Sbjct 38174 TTCAAATGAACTTATTTCCAGGGACGAGGGTCTTCATACAGATTTTGCATGTCT 38121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844080145280