Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq36 84.2 3e-11 >seq36 Length=80385 Score = 84.2 bits (92), Expect = 3e-11 Identities = 275/418 (66%), Gaps = 16/418 (4%) Strand=Plus/Minus Query 65089 GCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GCTATTTATTGGTT 65147 || ||||||||||| || || || || ||| || || || ||| || |||| |||| | Sbjct 38266 GCATTTGCGTGTGTAGAAGGAATTTTTTTCAGTGGTTCTTT-TGCTGCAATTTTTTGGCT 38208 Query 65148 GAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGA 65207 || ||| | || | |||||||| ||| || |||||||||||||||||| | || || Sbjct 38207 CAAAAAGAGAGGATTGATGCCAGGACTAACATTTTCAAATGAACTTATTTCCAGGGACGA 38148 Query 65208 GGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTT---CAAG-ACTTTGCGTAATAGACCCA 65263 |||||| || || |||| | || || || |||| || || | |||| | Sbjct 38147 GGGTCTTCATACAGATTTTG-CATG--TCTTTTACACAAGTACATT-AGAAATA-----A 38097 Query 65264 CTACCGAAACTATCCACGCCATCGTGAAAGAGGCGGTTGAGATTGAGAAAGGGTTCATCT 65323 | | ||| || | ||||| || | || || || || || || |||| ||| | Sbjct 38096 GT-GCAAAAGCATTAAAGCCATAGTTATGGAAGCAGTGGAAATAGAAAAAGAGTTTTTGA 38038 Query 65324 TGGACGCACTCCCATGTAATCTCATCGGTATGAACTCTGAGAAGATGTCCGAGTACATTG 65383 |||||| | ||| || | | || || ||||| | | | ||| ||||||| | Sbjct 38037 CAGACGCATTACCAGTTAGTTTGATTGGAATGAATTGTAACCTTATGGGACAGTACATAG 37978 Query 65384 AGTATGTGTCGGATCGTCTCCTCAAACAAGTTGGGGTGCCACCCATTTGGAACGCGAAGA 65443 | | |||| | ||| | || | | | | || | || | | | || |||| | Sbjct 37977 AATTTGTGGCAGATAGACTGTTATATGCATTAGGAGAGCAAAAAGTATACAATACGAAAA 37918 Query 65444 ATCCATTTGACTTTATGGAAAACATTAGCCTTGATGGGAAGACCAACTTCTTTGAGAA 65501 |||||||||| |||||||||||| | || | || || || || || |||||||| || Sbjct 37917 ATCCATTTGATTTTATGGAAAACTTGAGTTTGGAGGGAAAAACAAATTTCTTTGATAA 37860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569137658560