Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq34 116 5e-21 seq32 116 5e-21 >seq34 Length=123199 Score = 116 bits (128), Expect = 5e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || || ||||| || || || || | ||||| || || Sbjct 109814 TATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTC 109755 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 || | || || || ||||||| ||||||||||| || ||||| ||||| || || || Sbjct 109754 GGATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCA 109695 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||| ||||||||||||| || |||||||| ||||| ||| | || | | ||||| || Sbjct 109694 GCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAA 109635 Query 172041 CGTTCAAAAGGA 172052 | || ||||| Sbjct 109634 TATCCAGAAGGA 109623 >seq32 Length=103007 Score = 116 bits (128), Expect = 5e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || || ||||| || || || || | ||||| || || Sbjct 13387 TATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTC 13446 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 || | || || || ||||||| ||||||||||| || ||||| ||||| || || || Sbjct 13447 GGATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCA 13506 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||| ||||||||||||| || |||||||| ||||| ||| | || | | ||||| || Sbjct 13507 GCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAA 13566 Query 172041 CGTTCAAAAGGA 172052 | || ||||| Sbjct 13567 TATCCAGAAGGA 13578 Score = 116 bits (128), Expect = 5e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 171861 TATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTC 171920 |||||| || ||||| || || || ||||| || || || || | ||||| || || Sbjct 23353 TATGCAGATATTTGTAAAGACACTGACTGGTAAGACAATTACTTTGGAGGTAGAAAGCTC 23294 Query 171921 AGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCA 171980 || | || || || ||||||| ||||||||||| || ||||| ||||| || || || Sbjct 23293 GGATAGCATTGAAAATGTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCA 23234 Query 171981 GCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAA 172040 ||| ||||||||||||| || |||||||| ||||| ||| | || | | ||||| || Sbjct 23233 GCAGAGACTTATTTTTGCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAA 23174 Query 172041 CGTTCAAAAGGA 172052 | || ||||| Sbjct 23173 TATCCAGAAGGA 23162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861890156640