Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq34 125 1e-23 seq32 125 1e-23 >seq34 Length=123199 Score = 125 bits (138), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 |||||||| || ||||| ||||| || || | |||||||| |||||||| | |||| Sbjct 109632 ATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTC 109691 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || |||||||| ||||||||||| ||||| || || | ||| | |||| ||| || Sbjct 109692 TGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTA 109751 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || || || || | ||| || || ||||| || || || ||||||||||| ||| Sbjct 109752 TCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGC 109811 Query 193359 AT 193360 || Sbjct 109812 AT 109813 >seq32 Length=103007 Score = 125 bits (138), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 |||||||| || ||||| ||||| || || | |||||||| |||||||| | |||| Sbjct 13569 ATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTC 13510 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || |||||||| ||||||||||| ||||| || || | ||| | |||| ||| || Sbjct 13509 TGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTA 13450 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || || || || | ||| || || ||||| || || || ||||||||||| ||| Sbjct 13449 TCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGC 13390 Query 193359 AT 193360 || Sbjct 13389 AT 13388 Score = 125 bits (138), Expect = 1e-23 Identities = 137/182 (75%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 193179 ATATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTC 193238 |||||||| || ||||| ||||| || || | |||||||| |||||||| | |||| Sbjct 23171 ATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTC 23230 Query 193239 TGTTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTA 193298 || || |||||||| ||||||||||| ||||| || || | ||| | |||| ||| || Sbjct 23231 TGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTA 23290 Query 193299 TCGGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGC 193358 || || || || || | ||| || || ||||| || || || ||||||||||| ||| Sbjct 23291 TCCGAGCTTTCTACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGC 23350 Query 193359 AT 193360 || Sbjct 23351 AT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899653702767840