Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq36 105 2e-17 seq29 104 7e-17 >seq36 Length=80385 Score = 105 bits (116), Expect = 2e-17 Identities = 114/146 (78%), Gaps = 4/146 (3%) Strand=Plus/Minus Query 133513 CGTTGCTTTTGC-TGTAGTAGAGGGCAtttttttCAGTGGTGCGTTCTGCT-CTATTTTT 133570 ||| || ||||| ||| ||||| || ||||||||||||||| | || |||| | |||||| Sbjct 38270 CGTGGCATTTGCGTGT-GTAGAAGGAATTTTTTTCAGTGGTTCTTT-TGCTGCAATTTTT 38213 Query 133571 TGGCTTAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGG 133630 ||||| |||||| | || | | || ||||| ||||| || ||||||||||| ||| Sbjct 38212 TGGCTCAAAAAGAGAGGATTGATGCCAGGACTAACATTTTCAAATGAACTTATTTCCAGG 38153 Query 133631 GACGAGGCACTTCACACCGAATTTGC 133656 ||||||| ||||| || || ||||| Sbjct 38152 GACGAGGGTCTTCATACAGATTTTGC 38127 >seq29 Length=110338 Score = 104 bits (114), Expect = 7e-17 Identities = 225/335 (67%), Gaps = 15/335 (4%) Strand=Plus/Plus Query 381028 GAAGAAGATGACCTTGGTCCTATTTACGGATTTCAGTGGAGACATTTTAACGCCGATTAT 381087 |||| | ||||||| || ||| |||| || |||||||||||||||| | || ||| Sbjct 17371 GAAGCAAATGACCTGGGACCTGTTTATGGCTTTCAGTGGAGACATTATGGTGCACCATAT 17430 Query 381088 GATAATTGTGATAGTGATTATACTGGTAAGGGTGTCGACCAGTTAAAATATATCATAGAC 381147 || | || | | |||| || ||||| | || ||| | | || | || || Sbjct 17431 GAAACGTGCAAGACAAATTACGAAGGAAAGGGAATTGATCAGCTTAGGGATGTTATTGAG 17490 Query 381148 CAGCTAAA---AAATCCTGAAACAAGAAATTCACGCCGACTAATTATGACTGCGTGGAAT 381204 || | || |||||| ||| || | | |||| ||| || |||||||||| Sbjct 17491 CAAATTAAGACAAATCC---AACCAGCA------GAAGACTGATTGTGTGTGCGTGGAAT 17541 Query 381205 CCTTGCCAGATTAATGATATGGCTTTACCACCTTGCCATATTTTATGCCAGTTCAATGTT 381264 |||| ||| |||| || ||||| | ||||| || |||| ||||| || || || || Sbjct 17542 CCTTTACAGCTTAAGGAAATGGCACTTCCACCGTGTCATACTTTATTTCACTTTAAGGT- 17600 Query 381265 TCGGCTGGTAATAAGTTAAGTTGTGCTTTATATCAGCGTAGCGGTGATGTTGGTCTGGGT 381324 | |||||| |||||||| || | | || || | |||||||||||| ||||| Sbjct 17601 --GTATGGTAACAAGTTAAGCTGCATTCTGTACCAAAGATCAGGTGATGTTGGTTTGGGT 17658 Query 381325 GTTCCATTCAATATTGCTTCGTATTCTATGCTTAC 381359 ||||| || || ||||| ||| || ||||||| Sbjct 17659 GTTCCTTTTAACATTGCAAGTTATGCTTTGCTTAC 17693 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471816430824894