Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_021857.1 Length=41475 Score E Sequences producing significant alignments: (Bits) Value seq18 408 1e-109 >seq18 Length=4217 Score = 408 bits (452), Expect = 1e-109 Identities = 666/953 (70%), Gaps = 11/953 (1%) Strand=Plus/Plus Query 23368 TTTTTATGATGTATTTGGGTCTATTTTTTACTTCAATATAGATTCTACCTATATATTCTC 23427 |||||| || ||| | |||| || || ||| |||||||| ||||| |||||||| | Sbjct 1871 TTTTTAAAATATATCTTGGTCGTTTCTTAGTTTCCATATAGATCCTACCAATATATTCCC 1930 Query 23428 CGAGAACACCAATCCCGATCAGTTGCACTCCACCCAAGAAAAGTATTGATACAAGCAGGG 23487 | | ||| || || || || ||||| || ||||| || || || ||||| || | | | Sbjct 1931 CTAAAACGCCTATTCCTATAAGTTGTACACCACCTAAAAATAGGATTGAAACTAATAATG 1990 Query 23488 AGGGATACCCGCGTACTGGGTTACCAAAGACAAGGGTGTCTATAATCATCCATGCACCAT 23547 | ||||| || ||| || || | | || || |||| ||||| ||| | ||||| Sbjct 1991 ACGGATATCCTTTTACATCATTTCCCCAAATAATAGTTTCTAAAATCAACCAAGAACCAT 2050 Query 23548 ATAAAAATGAAATGCTTGCAACAAACAAGCCTATATAAGTCCATACGCGAAGAGGAAAGG 23607 ||||||| || | | |||||| || | || | ||| ||||| | | | ||| | | Sbjct 2051 ATAAAAAAGATAAGGTTGCAATTAAAAGTCCAACATATGTCCAAATTCTCAAAGGTATCG 2110 Query 23608 TTGAAAAACTTGTGATACCTTCCAGTGCCAGATTCCATAATTTCCAGCCATTAAATTTTG 23667 ||||||||||||| | ||||| | ||| |||||||| | ||||| |||||||| || | Sbjct 2111 TTGAAAAACTTGTAACCCCTTCTAATGCAAGATTCCAAAGCTTCCACCCATTAAACTTGG 2170 Query 23668 AGATGCCAGCAACACGCTCTGCGCGTACATATTCCACGACATCCGTCTGACCACCCACCC 23727 |||||| | | || |||||||| || ||||| ||| ||||| |||| Sbjct 2171 TTTGACCAGCACTTCTTGTAGGACGAACATATTCAACAACATCGATCTTTCCACCAACCC 2230 Query 23728 AGCTCAGTATGCCTTTCATGAAAAGATTGCGCTCAGGCAACAGTTTAATGTTCTCCACAA 23787 | |||| |||||||| ||||| || ||||| | ||||| || || |||| Sbjct 2231 AAGAAAGTACTCCTTTCATAAAAAGGTTTATTTCAGGTAGTCTCTTAATATTTTCTACAA 2290 Query 23788 CCTCACGAGACATGAGTCGAAAATCTCCGACATTTTCCTCGATCTTTGGGGTGCTTATTT 23847 ||| | |||||| | ||||||||| || |||||||| || || || || | ||| || | Sbjct 2291 TCTCTCTAGACATTAATCGAAAATCACCAACATTTTCTTCAATTTTAGGTGAGCTAATCT 2350 Query 23848 TGTTGTGTAATTTATAGAACCACTCAGCTG----TCTTACGTTTCAGTCGTCCATCAGTT 23903 |||| |||||| ||| || | ||| | |||| ||| | | | | |||||| Sbjct 2351 TGTTATGTAATCGATAAAATGCCAAAGCCGTTGATCTT---TTTAAATAG-CTATCAGTA 2406 Query 23904 GAGCGGTCTGAACGTTTAGCAAGCACCATGTCAGCACCTGCCTGCCACTTTTCAATAAGA 23963 | ||| |||||||| | ||||| ||||| || |||||||||||| |||| || Sbjct 2407 CTTCTGTCACTTCGTTTAGCTAAAACCATATCAGCTCCAGCCTGCCACTTTGCAATCAGT 2466 Query 23964 TGAGGGATAACCTCAATTGGGTCTTGCAGGTCGACATCAATAGGAATTACAGCATCGCCG 24023 | || ||||||||||| ||||| || ||||| |||||||| ||||| |||||||| || Sbjct 2467 AGCGGAATAACCTCAATGGGGTCCTGAAGGTCAACATCAATTGGAATAACAGCATCACCA 2526 Query 24024 CTTGCATGGTCTAACCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGCGTGTAAATGAC 24083 ||||||| |||| |||||||||||| || || |||||||||||||| | ||||| Sbjct 2527 GTTGCATGCTCTATCCCTGCAAATAAAGCAGGCTCTTTACCAAAGTTTCTAGTAAAACTT 2586 Query 24084 AGCGGAACAACTAGCGGGTCTGAAACAGCCAGCGCGTTAATAATTGACTCTGTGGCATCT 24143 | | ||| | | |||| || | || ||||||||||| | ||||| ||| Sbjct 2587 AATGCTCTAACAAACTTATCTGTAAGTGATAGTTCGTTAATAATTAATTCTGTTTTGTCT 2646 Query 24144 TTACTTCCGTCATTTATGAATACAATTTCTACTTCATATGGCTTCAACTCTTGGA-ATTC 24202 ||||| || ||||| ||||| | || || || |||||| ||| || | | | | Sbjct 2647 TTACTACCATCATTAATGAAAATGATCTCCACATCATATTTCTT-AAGGGGAGCATAATT 2705 Query 24203 ACGTACCGTTTTATAGAAAACAGGTATCGCTTCTTCTTCATTGAAGACAGGAACGACAAG 24262 | || | | ||| |||| ||| || |||||||||||||| || |||||||| | || Sbjct 2706 TCTAACAGCGTCATAAAAAATAGGGATAGCTTCTTCTTCATTAAAAACAGGAACAATTAG 2765 Query 24263 AGATATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGACGAAACC 24315 ||||||||||| | | | |||||| || | | |||||||| | ||||| Sbjct 2766 AGATATTTTCA-TACTACTTCCTAAACACTAAATATTTTGAATATAAAAAACC 2817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132598302374428