Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq34 86.0 4e-12 seq32 86.0 4e-12 >seq34 Length=123199 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| |||| |||| |||| ||| | ||||| |||||||| || ||||| || Sbjct 109584 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 109643 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 |||| | | | || ||||| || ||||| || || || |||| ||||| || | Sbjct 109644 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 109703 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || || ||||| | || ||| |||||| | | || || | || Sbjct 109704 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCT 109763 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || ||||| || || || ||||||||||| |||||||| Sbjct 109764 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 109813 >seq32 Length=103007 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| |||| |||| |||| ||| | ||||| |||||||| || ||||| || Sbjct 13617 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 13558 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 |||| | | | || ||||| || ||||| || || || |||| ||||| || | Sbjct 13557 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 13498 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || || ||||| | || ||| |||||| | | || || | || Sbjct 13497 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCT 13438 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || ||||| || || || ||||||||||| |||||||| Sbjct 13437 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 13388 Score = 86.0 bits (94), Expect = 4e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 34748 TTTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCC 34807 |||||||| |||| |||| |||| ||| | ||||| |||||||| || ||||| || Sbjct 23123 TTTCCTCCTCTCAGTCTCAAAACCAAGTGCAGTGTGCTTTCCTTCTGGATATTATAATCT 23182 Query 34808 GATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGC 34867 |||| | | | || ||||| || ||||| || || || |||| ||||| || | Sbjct 23183 GATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAAAATAAGTCTCTGCTGCTCAGGA 23242 Query 34868 GGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCG 34927 || | || || ||||| | || ||| |||||| | | || || | || Sbjct 23243 GGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATTTTCAATGCTATCCGAGCTTTCT 23302 Query 34928 ACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || ||||| || || || ||||||||||| |||||||| Sbjct 23303 ACCTCCAAAGTAATTGTCTTACCAGTCAGTGTCTTTACAAATATCTGCAT 23352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325692553898378