Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_022749.1 Length=39758 Score E Sequences producing significant alignments: (Bits) Value seq18 374 2e-99 >seq18 Length=4217 Score = 374 bits (414), Expect = 2e-99 Identities = 664/961 (69%), Gaps = 8/961 (1%) Strand=Plus/Plus Query 21722 TTTATTTCTCTTTTAACAAG-TAGCGAGGTCTCTGTTTAACTTCGGTATAAATCCGGCCA 21780 |||| |||||||| | || || | |||| | ||| ||| |||| |||| ||| Sbjct 1861 TTTAAATCTCTTTTTAAAATATATCTTGGTCGTTTCTTAGTTTCCATATAGATCCTACCA 1920 Query 21781 ATGTACTCGCCCAAAACTCCGATACCAATGAGCTGCACACCACCGAGAAAAAGTATTGAT 21840 || || || || ||||| || || || || || || |||||||| | ||| || ||||| Sbjct 1921 ATATATTCCCCTAAAACGCCTATTCCTATAAGTTGTACACCACCTAAAAATAGGATTGAA 1980 Query 21841 ACCAGCAATGATGGATAACCGCGCACAGGATT--CCCGAATGCAAGCGTATCAATGATCA 21898 || | ||||| ||||| || ||| ||| ||| ||| || || || | |||| Sbjct 1981 ACTAATAATGACGGATATCCTTTTACATCATTTCCCCAAAT--AATAGTTTCTAAAATCA 2038 Query 21899 TCCAGGCACCGTACAGGAAAGCCAGGCCTGCAACGAACAGGCCAATGTACGTCCACATGC 21958 ||| | ||| || | |||| | | ||||| || || |||| || ||||| || | Sbjct 2039 ACCAAGAACCATATAAAAAAGATAAGGTTGCAATTAAAAGTCCAACATATGTCCAAATTC 2098 Query 21959 GTAACGGAAATGTTGAGAAGCTGGTAATCCCTTCAAGCGCCAGGTTCCAGAGCTTCCAGC 22018 || || | ||||| || || |||| |||||| | || || ||||| |||||||| | Sbjct 2099 TCAAAGGTATCGTTGAAAAACTTGTAACCCCTTCTAATGCAAGATTCCAAAGCTTCCACC 2158 Query 22019 CATTAAACTTAGTGCTGCCAGCAACACGCTCAGCGCGAGCATATTCAACAACATCTGTAC 22078 |||||||||| || |||||| | || ||| |||||||||||||||| | Sbjct 2159 CATTAAACTTGGTTTGACCAGCACTTCTTGTAGGACGAACATATTCAACAACATCGATCT 2218 Query 22079 TCCCACCAACCCAGCTCAATACTCCTTTCATGAACAGGTTGCGTTCTGGTAATAATTTAA 22138 | ||||||||||| | |||||||||||| || ||||| ||| |||| | |||| Sbjct 2219 TTCCACCAACCCAAGAAAGTACTCCTTTCATAAAAAGGTTTATTTCAGGTAGTCTCTTAA 2278 Query 22139 TGTTTTCCACAACTCCGCGAGACATTAGTCGGAAATCGCCGACGTTCTCCTCAATCTTTG 22198 | ||||| |||| | | |||||||| ||| ||||| || || || || ||||| || | Sbjct 2279 TATTTTCTACAATCTCTCTAGACATTAATCGAAAATCACCAACATTTTCTTCAATTTTAG 2338 Query 22199 GATTGCTTATTTTATTGTGAAGTTTATAGAACCACTCAGCAGTCATGCGCTTCAGTCTTC 22258 | ||| || || || || | | ||| || | ||| || | || | | Sbjct 2339 GTGAGCTAATCTTGTTATGTAATCGATAAAATGCCAAAGCCGTTGATCTTTTTAAATAGC 2398 Query 22259 CGTCTGTAGAACGGTCTGAGCGCTTAGCCAGTACCATATCAGCACCTGCCTGCCACTTTT 22318 || ||| | ||| || ||||| | ||||||||||| || |||||||||||| Sbjct 2399 TATCAGTACTTCTGTCACTTCGTTTAGCTAAAACCATATCAGCTCCAGCCTGCCACTTTG 2458 Query 22319 CAATAAGATGAGGGATAACCTCAATCGGGTCCTGCAGATCGACATCAATAGGAATTACAG 22378 |||| || | || ||||||||||| |||||||| || || |||||||| ||||| |||| Sbjct 2459 CAATCAGTAGCGGAATAACCTCAATGGGGTCCTGAAGGTCAACATCAATTGGAATAACAG 2518 Query 22379 CATCGCCGCTTGCATGGTCTAACCCTGCAAATAAGGCTGGTTCTTTACCAAAGTTGCGTG 22438 |||| || ||||||| |||| |||||||||||| || || |||||||||||||| | | Sbjct 2519 CATCACCAGTTGCATGCTCTATCCCTGCAAATAAAGCAGGCTCTTTACCAAAGTTTCTAG 2578 Query 22439 TAAATGACAGCGGAACAACTAGCGGGTCTGAAACAGCCAGCGCGTTAATAATTGACTCTG 22498 |||| | | ||| | | |||| || | || ||||||||||| | |||| Sbjct 2579 TAAAACTTAATGCTCTAACAAACTTATCTGTAAGTGATAGTTCGTTAATAATTAATTCTG 2638 Query 22499 TGGCATCTTTACTTCCGTCATTTATGAATACAATTTCTACTTCATATGGCTTCAACTCTT 22558 | |||||||| || ||||| ||||| | || || || |||||| ||| || Sbjct 2639 TTTTGTCTTTACTACCATCATTAATGAAAATGATCTCCACATCATATTTCTT-AAGGGGA 2697 Query 22559 GGA-ATTCACGTACCGTTTTATAGAAAACAGGTATCGCTTCTTCTTCATTGAAGACAGGA 22617 | | | | | || | | ||| |||| ||| || |||||||||||||| || |||||| Sbjct 2698 GCATAATTTCTAACAGCGTCATAAAAAATAGGGATAGCTTCTTCTTCATTAAAAACAGGA 2757 Query 22618 ACGACAAGAGATATTTTCATTTCGCATCCCTAAAGACAATGAACTTTGAATAGACGAAAC 22677 || | ||||||||||||| | | | |||||| || | | |||||||| | |||| Sbjct 2758 ACAATTAGAGATATTTTCA-TACTACTTCCTAAACACTAAATATTTTGAATATAAAAAAC 2816 Query 22678 C 22678 | Sbjct 2817 C 2817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127103906419680