Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq34 93.3 3e-14 seq32 93.3 3e-14 >seq34 Length=123199 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 107631 GTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTAT 107690 || ||| ||||||| || |||||||| | || || |||||||||||||||| | Sbjct 109738 GTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAGCAGAGACTTATTTTT 109679 Query 107691 GCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCT 107750 || || ||||||||||| |||| | |||| | | || || || || || ||||| Sbjct 109678 GCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAATATCCAGAAGGAAAGC 109619 Query 107751 ACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAA 107794 || ||||| |||| |||||| || |||| ||||| || || || Sbjct 109618 ACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAAAAAGAAGAA 109575 >seq32 Length=103007 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 107631 GTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTAT 107690 || ||| ||||||| || |||||||| | || || |||||||||||||||| | Sbjct 13463 GTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAGCAGAGACTTATTTTT 13522 Query 107691 GCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCT 107750 || || ||||||||||| |||| | |||| | | || || || || || ||||| Sbjct 13523 GCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAATATCCAGAAGGAAAGC 13582 Query 107751 ACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAA 107794 || ||||| |||| |||||| || |||| ||||| || || || Sbjct 13583 ACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAAAAAGAAGAA 13626 Score = 93.3 bits (102), Expect = 3e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 107631 GTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAGCAGAGACTTATTTAT 107690 || ||| ||||||| || |||||||| | || || |||||||||||||||| | Sbjct 23277 GTCAAAGCAAAGATTCAAGACAAAGAAGGAATTCCTCCTGAGCAGCAGAGACTTATTTTT 23218 Query 107691 GCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAACATTCAAAAGGAGTCT 107750 || || ||||||||||| |||| | |||| | | || || || || || ||||| Sbjct 23217 GCAGGAAAACAGCTGGAAGACGGAAGAACATTATCAGATTATAATATCCAGAAGGAAAGC 23158 Query 107751 ACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAATAATAAAAA 107794 || ||||| |||| |||||| || |||| ||||| || || || Sbjct 23157 ACACTGCACTTGGTTTTGAGACTGAGAGGAGGAAAAAAGAAGAA 23114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876498598718