Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq34 84.2 4e-11 seq32 84.2 4e-11 >seq34 Length=123199 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/126 (74%), Gaps = 11/126 (9%) Strand=Plus/Plus Query 81652 TTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC-----------AAA 81700 ||||||||| ||||||||||| |||| ||||| | |||||| | | ||| Sbjct 109622 TTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAA 109681 Query 81701 GATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATT 81760 || ||||| || || | ||| | ||| |||| || ||||||||||||||||| | ||| Sbjct 109682 AATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATT 109741 Query 81761 TTCAAT 81766 |||||| Sbjct 109742 TTCAAT 109747 >seq32 Length=103007 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/126 (74%), Gaps = 11/126 (9%) Strand=Plus/Minus Query 81652 TTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC-----------AAA 81700 ||||||||| ||||||||||| |||| ||||| | |||||| | | ||| Sbjct 13579 TTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAA 13520 Query 81701 GATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATT 81760 || ||||| || || | ||| | ||| |||| || ||||||||||||||||| | ||| Sbjct 13519 AATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATT 13460 Query 81761 TTCAAT 81766 |||||| Sbjct 13459 TTCAAT 13454 Score = 84.2 bits (92), Expect = 4e-11 Identities = 93/126 (74%), Gaps = 11/126 (9%) Strand=Plus/Plus Query 81652 TTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAAC-----------AAA 81700 ||||||||| ||||||||||| |||| ||||| | |||||| | | ||| Sbjct 23161 TTCCTTCTGGATATTATAATCTGATAATGTTCTTCCGTCTTCCAGCTGTTTTCCTGCAAA 23220 Query 81701 GATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATATT 81760 || ||||| || || | ||| | ||| |||| || ||||||||||||||||| | ||| Sbjct 23221 AATAAGTCTCTGCTGCTCAGGAGGAATTCCTTCTTTGTCTTGAATCTTTGCTTTGACATT 23280 Query 81761 TTCAAT 81766 |||||| Sbjct 23281 TTCAAT 23286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903410499856320