Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Enterocytozoon_20hepatopenaei_20[genbank_20GCA_5F002081675.1_202017- 04-06] 62 sequences; 3,253,521 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq35 127 5e-24 seq36 122 2e-22 seq46 105 2e-17 seq42 105 2e-17 seq21 89.7 1e-12 >seq35 Length=128636 Score = 127 bits (140), Expect = 5e-24 Identities = 175/244 (72%), Gaps = 8/244 (3%) Strand=Plus/Minus Query 279854 CGTTCTATTCCTCATTTAATGGATGGTTTGAAACCTTCACAGCGTAAGATTATATTCAGT 279913 |||||||||||| | |||| |||||||| || ||| || | || |||| || Sbjct 43836 CGTTCTATTCCTTCTGTAATCGATGGTTTAAAGCCTGGTCAAAGAAAAGTTATTTTTTCA 43777 Query 279914 TGTTTCAAAAGAAAATTGGTAAAGGAAATTCGTGTTGCTCAGTTAGCAGGTTATGTTTCA 279973 ||||| |||||||| || ||| ||||| || || ||| ||| ||||||||||||| Sbjct 43776 TGTTTTAAAAGAAATTTAAGAAATGAAATAAAAGTAGCACAGCTAGTAGGTTATGTTTCA 43717 Query 279974 GAACATGCAGGTTATCATCACGGTGAAGCGTC----TCTTCAAGGTGCTATTGTAGGTCT 280029 ||||| | | ||||||||||||||||| || || |||| | ||| | | | Sbjct 43716 GAACACTCTGCATATCATCACGGTGAAGCATCGTTATCATCAA----CAATTATCAATTT 43661 Query 280030 TGCCCAAGATTTTATGGCTTCAAACAACTTAAATCTGCTTTCACCAAATGGTCAATTTGG 280089 || || || ||| | | |||||| ||||| |||||| ||||| |||||||||||| Sbjct 43660 AGCGCATGACTTTGTAGGGAGCAACAACATAAATTTGCTTTTACCAATTGGTCAATTTGG 43601 Query 280090 TTCT 280093 |||| Sbjct 43600 TTCT 43597 >seq36 Length=80385 Score = 122 bits (134), Expect = 2e-22 Identities = 400/608 (66%), Gaps = 23/608 (4%) Strand=Plus/Minus Query 131575 AGTTCTTGCATTCTTCGCCGGAAGTGATGGCATTGTTATTGAAAATCTTGTTATTAATTT 131634 |||||||||||| || || | | ||||| ||||| | ||||||| || | | || | Sbjct 38555 AGTTCTTGCATTTTTTGCTGCATCAGATGGAATTGTAAATGAAAAT-TTATCAGAAAGAT 38497 Query 131635 CATTCAA--GAAATTGATATTCCTGAAGTAACATCGTTCTACACATTTCAAGCCGCTGTT 131692 ||||| || || ||| |||| || | || ||| |||||| || | Sbjct 38496 T-TTCAAATGATGTTACCATTTTGGAAGCAAAGTGTTTTTACGGCTTTCAAATTGCAATA 38438 Query 131693 GAATCTATTCATAGCGAGATGTATTCATTATTGATTGAGAGTCTTGTTAAAAATGAAGAT 131752 ||| || ||| || ||||||||| |||||| || | | || | || | | Sbjct 38437 GAAAACATACATTCAGAAATGTATTCAAAATTGATAGAAACATTGGTACCAGATTATAAA 38378 Query 131753 GATAAAAATAAATTATTTGATGCTGTAAATAAATTTCCTGCAATTAAAAAGAAAGCAGAA 131812 || ||||| | | ||| |||| || | || | || |||||||| || ||||||||| Sbjct 38377 GAGCAAAATTATCTTTTTAATGCAATAGAAAACATACCAGCAATTAAGAAAAAAGCAGAA 38318 Query 131813 TGGGCTATTAAATGGATTCAAGATGATTCCGCTAATTTTTCTACAAGACTTGTAGCTTTT 131872 ||||| || |||||| | ||| | || ||| || ||| || || ||| Sbjct 38317 TGGGCACAAAAGTGGATTGTAAGCGATACTTCT---TTTGACACGAGATGCGTGGCATTT 38261 Query 131873 GCTTGTGTTGAAGGTATATTCTTTTCAG--GTGCTTTCTGTGCTATCTTTTGGCTTAAGA 131930 || ||||| ||||| || || |||||| || |||| ||| || |||||||| || | Sbjct 38260 GCGTGTGTAGAAGGAATTTT--TTTCAGTGGTTCTTTTGCTGCAATTTTTTGGCTCAAAA 38203 Query 131931 AGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGAGATGAAGCAT 131990 || | ||||||||||| ||||| |||| || ||| || | || || || || || | Sbjct 38202 AGAGAGGATTGATGCCAGGACTAACATTTTCAAATGAACTTATTTCCAGGGACGAGGGTC 38143 Query 131991 TGCATACTGAATTTGCTATATTAATCTATAGAAAATTTGCTGATAAACTTGATGAAAATA 132050 | ||||| || ||||| || | | || | || | | | ||| | || ||| | Sbjct 38142 TTCATACAGATTTTGC-ATGT---CTTTTACACAAGTACATTAGAAA-TAAGTGCAAA-A 38089 Query 132051 ATATTAAA--CA-ACTTATAAGCGAAGCAGTTGATATCGAGAAGGAGTTTATTACAGAAG 132107 |||||| || | |||| |||||||| || || || || |||||| | ||||| | Sbjct 38088 GCATTAAAGCCATAGTTAT---GGAAGCAGTGGAAATAGAAAAAGAGTTTTTGACAGACG 38032 Query 132108 CTTTGCCTTGCAATTTGATTGGGATGAATGCTGACTCTATGAAGGAGTACATTGAATTCG 132167 | || || | ||||||||| |||||| | || |||| ||||||| ||||| | Sbjct 38031 CATTACCAGTTAGTTTGATTGGAATGAATTGTAACCTTATGGGACAGTACATAGAATTTG 37972 Query 132168 TTGCTGAT 132175 | || ||| Sbjct 37971 TGGCAGAT 37964 >seq46 Length=48756 Score = 105 bits (116), Expect = 2e-17 Identities = 176/250 (70%), Gaps = 6/250 (2%) Strand=Plus/Plus Query 36068 CACCATTCCGGTCTTGTACCGGTAATCAAAGAGATCATTGAGATTCTTTTTGA-GAAAAA 36126 ||||| || |||||| |||| | | ||||| || ||| ||||||||| | || || Sbjct 1433 CACCACTCTGGTCTTTTACCCATCGTAAAAGAAATAGGTGAAATTCTTTTTCAAGAGGAA 1492 Query 36127 GTATATCAAACTGATGATGGTTACAGAGACATTCGCTGTCGGAATCAACATGCCTACAAG 36186 | |||||| | | | | ||||| | || || | ||| | ||||||||| ||| Sbjct 1493 CT-TATCAAGGTTCTTTTTGCCACAGAATCTTTTTCTATAGGATTGAACATGCCTGCAAA 1551 Query 36187 AACAGTAGTGTTTACTGAACTTGAGAAGTTTGATGGAAAGGAAAAAAGAGTACTTTTACC 36246 |||||| | ||||| | |||| |||| ||||| || || |||| || |||| || Sbjct 1552 AACAGTCATATTTACGGCACTTAAGAAATTTGACGGGCGTGACGAAAGGGTTCTTT--CC 1609 Query 36247 ATCTGAGTATACT--CAGATCGCTGGTCGTGCTGGAAGACGAGGAAAAGATACCGTAGGC 36304 | | | ||||| ||||| |||||||| ||||| || ||||||||||| ||||| Sbjct 1610 TCCAGCGAATACTGTCAGATGAGCGGTCGTGCAGGAAGGCGTGGAAAAGATACAGTAGGA 1669 Query 36305 CACGTAATTT 36314 |||||| ||| Sbjct 1670 CACGTAGTTT 1679 >seq42 Length=50281 Score = 105 bits (116), Expect = 2e-17 Identities = 176/250 (70%), Gaps = 6/250 (2%) Strand=Plus/Plus Query 36068 CACCATTCCGGTCTTGTACCGGTAATCAAAGAGATCATTGAGATTCTTTTTGA-GAAAAA 36126 ||||| || |||||| |||| | | ||||| || ||| ||||||||| | || || Sbjct 29629 CACCACTCTGGTCTTTTACCCATCGTAAAAGAAATAGGTGAAATTCTTTTTCAAGAGGAA 29688 Query 36127 GTATATCAAACTGATGATGGTTACAGAGACATTCGCTGTCGGAATCAACATGCCTACAAG 36186 | |||||| | | | | ||||| | || || | ||| | ||||||||| ||| Sbjct 29689 CT-TATCAAGGTTCTTTTTGCCACAGAATCTTTTTCTATAGGATTGAACATGCCTGCAAA 29747 Query 36187 AACAGTAGTGTTTACTGAACTTGAGAAGTTTGATGGAAAGGAAAAAAGAGTACTTTTACC 36246 |||||| | ||||| | |||| |||| ||||| || || |||| || |||| || Sbjct 29748 AACAGTCATATTTACGGCACTTAAGAAATTTGACGGGCGTGACGAAAGGGTTCTTT--CC 29805 Query 36247 ATCTGAGTATACT--CAGATCGCTGGTCGTGCTGGAAGACGAGGAAAAGATACCGTAGGC 36304 | | | ||||| ||||| |||||||| ||||| || ||||||||||| ||||| Sbjct 29806 TCCAGCGAATACTGTCAGATGAGCGGTCGTGCAGGAAGGCGTGGAAAAGATACAGTAGGA 29865 Query 36305 CACGTAATTT 36314 |||||| ||| Sbjct 29866 CACGTAGTTT 29875 >seq21 Length=229526 Score = 89.7 bits (98), Expect = 1e-12 Identities = 163/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 72167 TTACTTTGCCAAACACAACGTGTTTGTTATTTAA--ATGTGGTTGAGGTGCAAGTGTAAT 72224 ||| ||| ||||| ||||||||||| || ||| | || ||| || | |||||| Sbjct 19181 TTATTTTTCCAAAAACAACGTGTTTTCCATCTAACCACGTTGTTTTCTTGAA--TGTAAT 19124 Query 72225 GAAGAATTGCGAGTTATTTGAATCAGGACCCGAGTTAGCCATAGAAACCAAACCTGCTTC 72284 |||||| || || |||| || ||||| || ||||| | | |||||||| Sbjct 19123 GAAGAACTGTGAACCGTTTGTATTTGGACCACTATTTGCCATGCTTAAAAGCCCTGCTTC 19064 Query 72285 TGAATGCTT-TAATAAGAAATTCTCATCTTCAAAAGTTTCTCCATATATACTTTGACCTG 72343 |||||||| | | | ||||| ||||| ||||| ||||||||||||||||| ||| Sbjct 19063 AGAATGCTTATGCTTA-AAATTTTCATCATCAAACTTTTCTCCATATATACTTATACCAC 19005 Query 72344 AGCTTCCATCAAAGTTCACAATATCACCTCCTTGAACCATAAAATTATTAATTA 72397 |||||| || || |||||| ||||| | |||||||| || ||||| Sbjct 19004 CTGTTCCATTTCCTTTAGTAAAATCACCACCTTGCATCATAAAATCATCAATTA 18951 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186811857225582